Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1167 bp · LXL04_014061|LXL04_014061|OH1004|cDNA
ATGGCTCTGCTTACCGATCTCCTCAACCTCGACCTCTCTAGTCTCACCGATAAGATTATCGCCGAATATATATGGATCGGTGGATCGGGTATGGATCTTAGAAGCAAAGCAAGAACGCTTTCAGGACCGGTGTCGGATCCCAGTGAGCTACCGAAGTGGAACTACGACGGGTCTAGCACCGGACAAGCTCCCGGAGAAGACAGTGAAGTCATCCTATACCCTCAAGCAATCTTTAAAGATCCATTCAGGAGGGGCAACCA...
1167 bp · LXL04_014061|LXL04_014061|OH1004|CDS
ATGGCTCTGCTTACCGATCTCCTCAACCTCGACCTCTCTAGTCTCACCGATAAGATTATCGCCGAATATATATGGATCGGTGGATCGGGTATGGATCTTAGAAGCAAAGCAAGAACGCTTTCAGGACCGGTGTCGGATCCCAGTGAGCTACCGAAGTGGAACTACGACGGGTCTAGCACCGGACAAGCTCCCGGAGAAGACAGTGAAGTCATCCTATACCCTCAAGCAATCTTTAAAGATCCATTCAGGAGGGGCAACCA...
Protein
Download Protein FASTA388 aa · LXL04_014061|LXL04_014061|OH1004|PROTEIN
MALLTDLLNLDLSSLTDKIIAEYIWIGGSGMDLRSKARTLSGPVSDPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNHILVMCDAYTPAGEPIPTNKRAAAAKIFSNPEVEKEVTWYIYILFNFAHQFSLKTATFQPNFLNNLGVDRYGIEQEYTLLKKDVHWPLGWPQGGFPGPQGPYYCGIGADKAFGRDIVDAHYKACLYAGVNISGINGEVMPGQWEFQVGPSVGISAGDELWVARYILERITEIYG...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_014061 |
|---|---|
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_014061 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr03:41455970-41458503 (+) | |||||||||
| Description | Similar to Glutamine synthetase | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0006542 glutamine biosynthetic process Biological Process GO:0010150 leaf senescence Biological Process GO:0042128 nitrate assimilation Biological Process GO:0000325 plant-type vacuole Cellular Component GO:0005737 cytoplasm Cellular Component GO:0005739 mitochondrion Cellular Component GO:0005829 cytosol Cellular Component GO:0005886 plasma membrane Cellular Component GO:0009505 plant-type cell wall Cellular Component GO:0009506 plasmodesma Cellular Component GO:0009536 plastid Cellular Component GO:0009570 chloroplast stroma Cellular Component | |||||||||
| KEGG gene cross-reference | ath:AT1G66200 ath:AT5G37600 lsv:111883376 vvi:100246404 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF03951.25Gln-synt_N48-97 aaPF00120.30Gln-synt_C199-378 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| LXL04_014061 | PF03951.25 | Gln-synt_N | 48 | 97 | 9.1e-09 | 35.5 |
| LXL04_014061 | PF00120.30 | Gln-synt_C | 199 | 378 | 2.3e-14 | 53.9 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.