Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1896 bp · LXL04_012962|LXL04_012962|OH1004|cDNA
atggtacgtgcaccctcgggggcacggactggagtggtgatggccttcggttgtggtcagatcaatcatcacgttggattcgcgaggtgttgcggtaagtacataccccactcgttaggatccttaacgacaacaaggggtacttgtatctcggcttgtcggagtagtgaaagtaacgcatcggggccggtgtacgacatggtagtcatgccccatgttgtacatttggctggccgggcttacgagaagtttagaggtcg...
1896 bp · LXL04_012962|LXL04_012962|OH1004|CDS
ATGGTACGTGCACCCTCGGGGGCACGGACTGGAGTGGTGATGGCCTTCGGTTGTGGTCAGATCAATCATCACGTTGGATTCGCGAGGTGTTGCGGTAAGTACATACCCCACTCGTTAGGATCCTTAACGACAACAAGGGGTACTTGTATCTCGGCTTGTCGGAGTAGTGAAAGTAACGCATCGGGGCCGGTGTACGACATGGTAGTCATGCCCCATGTTGTACATTTGGCTGGCCGGGCTTACGAGAAGTTTAGAGGTCG...
Protein
Download Protein FASTA631 aa · LXL04_012962|LXL04_012962|OH1004|PROTEIN
MVRAPSGARTGVVMAFGCGQINHHVGFARCCGKYIPHSLGSLTTTRGTCISACRSSESNASGPVYDMVVMPHVVHLAGRAYEKFRGRLGEMGKLVGRQSPSYDTVLKHAKGDEPQKDDFVDGVVKIEVAVDVDGDDDTDWDQMLYRNLSQSMMAIKSSTINDSPRISHTRIVLGSAIASRIGLLALIVIWRSILTPYDTSASIDPTCLSSTTTTTTHRHEQPSVLFPFIAAAIENGIVWDSVYFVRIAQCGYEYEQTFAF...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_012962 |
|---|---|
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_012962 |
|---|---|
| Location | Chr03:21638711-21645964 (+) |
| Description | Similar to Pigv: GPI mannosyltransferase 2 |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0006506 GPI anchor biosynthetic process Biological Process GO:0005783 endoplasmic reticulum Cellular Component GO:0005789 endoplasmic reticulum membrane Cellular Component GO:0031501 mannosyltransferase complex Cellular Component GO:0000009 alpha-1,6-mannosyltransferase activity Molecular Function GO:0000030 mannosyltransferase activity Molecular Function GO:0004376 GPI mannosyltransferase activity Molecular Function GO:0120563 dol-P-Man:Man(1)GlcN-acyl-PI alpha-1,6-mannosyltransferase activity Molecular Function |
| KEGG gene cross-reference | dpo:4804187 hsa:55650 mmu:230801 rno:366478 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF04188.19Mannosyl_trans2175-631 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| LXL04_012962 | PF04188.19 | Mannosyl_trans2 | 175 | 631 | 7.2e-127 | 425.1 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.