Gene Card
Gene overview
cDNA / CDS / Protein Sequences
2304 bp · LXL04_011938|LXL04_011938|OH1004|cDNA
ATGGAGACCCTGCGTTTATGGAAGCCATCAGCGGTGGAGGTGACAAGACTGAAATCTTCATTTTGTATCTCTTTCTGTGGCTTGCAAGAAACCAGACTTGATTCTCTTCCCAGTGACATTGGGGATTGGTCGGGGGACCGGAATTTGGGTATGGAGTTCGTTCCTTCTGTAGGTAAATCCGGTGGTATGATCAGCTTTTGGGACAAATCCCTTTTCCAGGATATTGCGGTTATTAAATCCAGATTCTTTTTGGCGGTTGT...
2304 bp · LXL04_011938|LXL04_011938|OH1004|CDS
ATGGAGACCCTGCGTTTATGGAAGCCATCAGCGGTGGAGGTGACAAGACTGAAATCTTCATTTTGTATCTCTTTCTGTGGCTTGCAAGAAACCAGACTTGATTCTCTTCCCAGTGACATTGGGGATTGGTCGGGGGACCGGAATTTGGGTATGGAGTTCGTTCCTTCTGTAGGTAAATCCGGTGGTATGATCAGCTTTTGGGACAAATCCCTTTTCCAGGATATTGCGGTTATTAAATCCAGATTCTTTTTGGCGGTTGT...
Protein
Download Protein FASTA767 aa · LXL04_011938|LXL04_011938|OH1004|PROTEIN
METLRLWKPSAVEVTRLKSSFCISFCGLQETRLDSLPSDIGDWSGDRNLGMEFVPSVGKSGGMISFWDKSLFQDIAVIKSRFFLAVVGYWKRLVGETILVNIYAPQVNSEKKLHWRKLRDLINSRRGLGIHPKRDNSQILKLFFLLLTNFRTAQVPMKKMDLKGVVGLVFGNENSSSNEDSYVERLLDCISNGQLADDRRNAMAELQSVVAESHAAQLAFGEMGFPVLLGVLRDRDDVEMVIRNEALLLLTYLTREAEEI...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_011938 |
|---|---|
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_011938 | ||||||
|---|---|---|---|---|---|---|---|
| Location | Chr03:3216892-3224546 (-) | ||||||
| Description | Similar to GC6: Golgin candidate 6 | ||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | ||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | ||||||
| GO annotations (OH1004 source) | GO:0006886 intracellular protein transport Biological Process GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport Biological Process GO:0007030 Golgi organization Biological Process GO:0007264 small GTPase-mediated signal transduction Biological Process GO:0009791 post-embryonic development Biological Process GO:0032252 secretory granule localization Biological Process GO:0032527 protein exit from endoplasmic reticulum Biological Process GO:0035493 SNARE complex assembly Biological Process GO:0045056 transcytosis Biological Process GO:0048211 Golgi vesicle docking Biological Process GO:0048280 vesicle fusion with Golgi apparatus Biological Process GO:0061025 membrane fusion Biological Process | ||||||
| KEGG gene cross-reference | ath:AT3G27530 mmu:56041 sce:YDL058W These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
No result was found for this query.
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
| Protein | Organism | Description | Identity | Database | Confidence |
|---|---|---|---|---|---|
B0F9L4 | Arabidopsis thaliana | Golgin candidate 6 | 68.750% | Swiss-Prot | weak database homology |