Gene Card
Gene overview
cDNA / CDS / Protein Sequences
2133 bp · LXL04_008688|LXL04_008688|OH1004|cDNA
ATGGACGAGTATAGACAAGCTCACATCCTACCAGCTGCATGGATGAACAAAAGTCCATCAGAACTAGCAGAATCAAATCTCTTCATAATCTCTTGTTTCACTGCTGGCCTTATTGGCATCCTTACAATCGTCTACACCGCCTTTCAATGGCGAAGAAACATCAGCCTAAGTTGGACAAAAGCCATTGCCGGCACAAAAAAAGATCCAAAATCAATAATCGATCTCGTGTCCCCTCACACCTGGCACTTGGAAGCCATAGC...
2133 bp · LXL04_008688|LXL04_008688|OH1004|CDS
ATGGACGAGTATAGACAAGCTCACATCCTACCAGCTGCATGGATGAACAAAAGTCCATCAGAACTAGCAGAATCAAATCTCTTCATAATCTCTTGTTTCACTGCTGGCCTTATTGGCATCCTTACAATCGTCTACACCGCCTTTCAATGGCGAAGAAACATCAGCCTAAGTTGGACAAAAGCCATTGCCGGCACAAAAAAAGATCCAAAATCAATAATCGATCTCGTGTCCCCTCACACCTGGCACTTGGAAGCCATAGC...
Protein
Download Protein FASTA710 aa · LXL04_008688|LXL04_008688|OH1004|PROTEIN
MDEYRQAHILPAAWMNKSPSELAESNLFIISCFTAGLIGILTIVYTAFQWRRNISLSWTKAIAGTKKDPKSIIDLVSPHTWHLEAIARGKSLNCCVCLKSMSPSQSLGPMVSSGSFIHRCSICGALAHLNCSPNAHKDCKCVSMVGSEHVLHQWAIRWTEVIDQPDGTSFCTHCEEPCSPSFLGGSPIWCCLWCQRLIHVDCHSSMYRETGDICDMGPFKRLILSPLYVKVVSHSHSQPSSGGILSSITYGANEIACSVR...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_008688 |
|---|---|
| TK1151 ID | TkA03G344660 |
| OH-1004 ID | LXL04_008688 |
| Relationship / confidence | Non Reciprocal Best Hit / Complex relationship |
| Protein identity (%) | 94.100 |
| Protein coverage (%) | TK1151 92.922 / OH-1004 57.324Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_008688 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr02:106227757-106230394 (+) | |||||||||
| Description | Similar to DGK1: Diacylglycerol kinase 1 | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0006654 phosphatidic acid biosynthetic process Biological Process GO:0006952 defense response Biological Process GO:0007200 phospholipase C-activating G protein-coupled receptor signaling pathway Biological Process GO:0009409 response to cold Biological Process GO:0009611 response to wounding Biological Process GO:0009617 response to bacterium Biological Process GO:0035556 intracellular signal transduction Biological Process GO:0046339 diacylglycerol metabolic process Biological Process GO:0046473 phosphatidic acid metabolic process Biological Process GO:0046486 glycerolipid metabolic process Biological Process GO:0046834 lipid phosphorylation Biological Process GO:0048364 root development Biological Process | |||||||||
| KEGG gene cross-reference | ath:AT5G07920 ath:AT5G63770 hsa:1607 mmu:217480 rno:54248 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF00130.29C1_1152-210 aaPF00781.30DAGK_cat343-443 aaPF00609.25DAGK_acc489-646 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| LXL04_008688 | PF00130.29 | C1_1 | 152 | 210 | 1.3e-09 | 38.5 |
| LXL04_008688 | PF00781.30 | DAGK_cat | 343 | 443 | 5.2e-25 | 88.2 |
| LXL04_008688 | PF00609.25 | DAGK_acc | 489 | 646 | 2.8e-55 | 187.7 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.