Gene Card
Gene overview
cDNA / CDS / Protein Sequences
416 bp · LXL04_004379|LXL04_004379|OH1004|cDNA
CTGGTACTTGATGTACGTCATCTTCATGATAAGGAAAATGAAATTGATGATAAATTCAAGAAAATCTTTGATCCATCATACAAGCTTGATTATGAATCTTTGGAAGTTGGTAAGGCTGCTATTGGAAATTTATTAAGAGCAATCAGATACTTTTATGGCCAGTCAAAAATATTGTATCCACAACCTTCTAAGCATGGATCTGGTGGTTTAATACATTGGCCTGCTGAGCTGTACACTGTTGTTCCAAGTCGCCCTCTTTT...
309 bp · LXL04_004379|LXL04_004379|OH1004|CDS
CTGGTACTTGATGTACGTCATCTTCATGATAAGGAAAATGAAATTGATGATAAATTCAAGAAAATCTTTGATCCATCATACAAGCTTGATTATGAATCTTTGGAAGTTGGTAAGGCTGCTATTGGAAATTTATTAAGAGCAATCAGATACTTTTATGGCCAGTCAAAAATATTGTATCCACAACCTTCTAAGCATGGATCTGGTGGTTTAATACATTGGCCTGCTGAGCTGTACACTGTTGTTCCAAGTCGCCCTCTTTT...
Protein
Download Protein FASTA102 aa · LXL04_004379|LXL04_004379|OH1004|PROTEIN
MVLDVRHLHDKENEIDDKFKKIFDPSYKLDYESLEVGKAAIGNLLRAIRYFYGQSKILYPQPSKHGSGGLIHWPAELYTVVPSRPLFPRGFLWDEGFHQLLI
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_004379 |
|---|---|
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_004379 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr01:133978772-133979505 (+) | |||||||||
| Description | No functional description available | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0006457 protein folding Biological Process GO:0006487 protein N-linked glycosylation Biological Process GO:0009311 oligosaccharide metabolic process Biological Process GO:0010053 root epidermal cell differentiation Biological Process GO:0019082 viral protein processing Biological Process GO:0090627 plant epidermal cell differentiation Biological Process GO:0005634 nucleus Cellular Component GO:0005739 mitochondrion Cellular Component GO:0005783 endoplasmic reticulum Cellular Component GO:0005789 endoplasmic reticulum membrane Cellular Component GO:0016020 membrane Cellular Component GO:0070062 extracellular exosome Cellular Component | |||||||||
| KEGG gene cross-reference | ath:AT1G24320 ath:AT1G67490 cel:CELE_F13H10.4 hsa:7841 mmu:57377 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF03200.23Glyco_hydro_637-102 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| LXL04_004379 | PF03200.23 | Glyco_hydro_63 | 7 | 102 | 5.1e-28 | 98.8 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.