Gene Card
Gene overview
cDNA / CDS / Protein Sequences
804 bp · LXL04_004012|LXL04_004012|OH1004|cDNA
atgtgccGACATCCTCGCCGTCAAAGGAACGGCGCCGGCAGTAGTCGCAATGTAGAGTCCACGTCGCAAACGATTGCGATGATCGACGGCGCTGTAGTGAAATCTCACTCTGATCTTCTTGCCGCCGGCGAAAGCATATCTGCATGGGGAGTCTTACAGTCGGCCTTGGTGATACTGAAAGCCAATTCCTTCGAATCGTTGGGGTTTCCTATGCAATATGTTCCCTCACTGAATCGGCTCATGATCACTGAAGCAAAGGT...
804 bp · LXL04_004012|LXL04_004012|OH1004|CDS
ATGTGCCGACATCCTCGCCGTCAAAGGAACGGCGCCGGCAGTAGTCGCAATGTAGAGTCCACGTCGCAAACGATTGCGATGATCGACGGCGCTGTAGTGAAATCTCACTCTGATCTTCTTGCCGCCGGCGAAAGCATATCTGCATGGGGAGTCTTACAGTCGGCCTTGGTGATACTGAAAGCCAATTCCTTCGAATCGTTGGGGTTTCCTATGCAATATGTTCCCTCACTGAATCGGCTCATGATCACTGAAGCAAAGGT...
Protein
Download Protein FASTA267 aa · LXL04_004012|LXL04_004012|OH1004|PROTEIN
MCRHPRRQRNGAGSSRNVESTSQTIAMIDGAVVKSHSDLLAAGESISAWGVLQSALVILKANSFESLGFPMQYVPSLNRLMITEAKVNSFIHYFVAVQKITSLHDLEMAICENEGIGSFEELELGPMLKHPLVTHYFSVGSDVTEIFKITSQQIVTHLNILLHRKRKITVDDLLDYIAKREKESRENLCVRIQSLGMHIGNIMRGRRSEFTLLKKCSDGLDVDSKLDDDDGEAAKNDDIQDSGQTEMDCSLFSSHEIKQG...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_004012 |
|---|---|
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_004012 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr01:121806518-121807740 (-) | |||||||||
| Description | No functional description available | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0001708 cell fate specification Biological Process GO:0009793 embryo development ending in seed dormancy Biological Process GO:0009926 auxin polar transport Biological Process GO:0010305 leaf vascular tissue pattern formation Biological Process GO:0019827 stem cell population maintenance Biological Process GO:0048364 root development Biological Process GO:0005634 nucleus Cellular Component | |||||||||
| KEGG gene cross-reference | ath:AT1G08300 ath:AT4G13750 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
No result was found for this query.
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
| Protein | Organism | Description | Identity | Database | Confidence |
|---|---|---|---|---|---|
F4JTS8 | Arabidopsis thaliana | Protein NO VEIN | 45.596% | Swiss-Prot | moderate database homology |
A0A1P8ARG1 | Arabidopsis thaliana | Protein NO VEIN-LIKE | 41.951% | Swiss-Prot | moderate database homology |