Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1149 bp · LXL04_003917|LXL04_003917|OH1004|cDNA
ATGGAGGCCGAAATGAACTGCAACAACCTACCCAACTTTCTCTCTTCATTCGTCGACACTTTTGTTGACTTCTGCGTCGCCGGTATATTCTTGCCCGACCCTCCTTCTCCTCCGCTTTTCCAAACTTCCTTTCCTTCTCCCGACCGCCTAATAGCAATCGGTGACCTCCATGGCGACCTTCTCAAATCCAAGCAAGCCCTCCGTCTGGCCGGACTCATCGACTCCAACGACCGCTGGTCTGGTGGCTCCTCCACCCTTGT...
1149 bp · LXL04_003917|LXL04_003917|OH1004|CDS
ATGGAGGCCGAAATGAACTGCAACAACCTACCCAACTTTCTCTCTTCATTCGTCGACACTTTTGTTGACTTCTGCGTCGCCGGTATATTCTTGCCCGACCCTCCTTCTCCTCCGCTTTTCCAAACTTCCTTTCCTTCTCCCGACCGCCTAATAGCAATCGGTGACCTCCATGGCGACCTTCTCAAATCCAAGCAAGCCCTCCGTCTGGCCGGACTCATCGACTCCAACGACCGCTGGTCTGGTGGCTCCTCCACCCTTGT...
Protein
Download Protein FASTA382 aa · LXL04_003917|LXL04_003917|OH1004|PROTEIN
MEAEMNCNNLPNFLSSFVDTFVDFCVAGIFLPDPPSPPLFQTSFPSPDRLIAIGDLHGDLLKSKQALRLAGLIDSNDRWSGGSSTLVQVGDVLDRGGQEIKILYFLEKLKREAVKSGGNVITMNGNHEIMNVDGDFRFVTPSGLDEFTNWADWFCIGNNIKRLCDGSEKPRDLYDGIPSSFPRVKQEYAKGFRSRIAALRPQGPIATRFLSKNLTVVVVGESVFVHGGVLPNHVVYGLERINEEVRDWIIGLKDKVASSL...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_003917 |
|---|---|
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_003917 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr01:115206811-115207959 (+) | |||||||||
| Description | Similar to SLP2: Shewanella-like protein phosphatase 2 | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0006112 energy reserve metabolic process Biological Process GO:0006798 polyphosphate catabolic process Biological Process GO:0033363 secretory granule organization Biological Process GO:0044129 positive regulation of development of symbiont in host Biological Process GO:0005777 peroxisome Cellular Component GO:0005783 endoplasmic reticulum Cellular Component GO:0005829 cytosol Cellular Component GO:0009507 chloroplast Cellular Component GO:0019898 extrinsic component of membrane Cellular Component GO:0000298 endopolyphosphatase activity Molecular Function GO:0004721 phosphoprotein phosphatase activity Molecular Function GO:0016791 phosphatase activity Molecular Function | |||||||||
| KEGG gene cross-reference | ath:AT1G07010 ath:AT1G18480 spo:2538780 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF00149.34Metallophos49-162 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| LXL04_003917 | PF00149.34 | Metallophos | 49 | 162 | 3e-08 | 35.1 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.