Gene Card
Gene overview
cDNA / CDS / Protein Sequences
975 bp · LXL04_002311|LXL04_002311|OH1004|cDNA
ATGCCTGCTGTGGAGCTGGTCAACGACGGTCAAAGGCGGTCAAAAGTCGGTCAAGATCCGCCTAGACGCCCTAATCGGTCAAAGAAAGTCACTTTTCAGATTTCAATTTTAGGGGGTGACCTAATTCTCCCCACATTCTCTTGCAGCCGTTTTTCCTCCAAGTCTATATTCTCTCTCGATATTCCACACCGGCGATTGCTACTGATCCCTTCTTGTTTCCGACCACCGAAGCCTTCCGCCACCACCTGCGCTCCACAGCC...
975 bp · LXL04_002311|LXL04_002311|OH1004|CDS
ATGCCTGCTGTGGAGCTGGTCAACGACGGTCAAAGGCGGTCAAAAGTCGGTCAAGATCCGCCTAGACGCCCTAATCGGTCAAAGAAAGTCACTTTTCAGATTTCAATTTTAGGGGGTGACCTAATTCTCCCCACATTCTCTTGCAGCCGTTTTTCCTCCAAGTCTATATTCTCTCTCGATATTCCACACCGGCGATTGCTACTGATCCCTTCTTGTTTCCGACCACCGAAGCCTTCCGCCACCACCTGCGCTCCACAGCC...
Protein
Download Protein FASTA324 aa · LXL04_002311|LXL04_002311|OH1004|PROTEIN
MPAVELVNDGQRRSKVGQDPPRRPNRSKKVTFQISILGGDLILPTFSCSRFSSKSIFSLDIPHRRLLLIPSCFRPPKPSATTCAPQPSLYGLRSTTTTTPAFLHRISIDLNPHWIVRVSIEYRQALSPQVAFQSTGAGILIMQKFDIVPFLELIQKYKVTIGPFVPPIVLAIAKNEEVVDKFDIVPFLQVLLFCLFVLNSEEADEEMYQERSVLQVEEDEEEDLNRIKEEKDTGAKVNDGQGELSDSNIGDTPFSVGRAP...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_002311 |
|---|---|
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_002311 |
|---|---|
| Location | Chr01:45893162-45895041 (+) |
| Description | Similar to 4CL: 4-coumarate--CoA ligase |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0009611 response to wounding Biological Process GO:0009698 phenylpropanoid metabolic process Biological Process GO:0009753 response to jasmonic acid Biological Process GO:0005524 ATP binding Molecular Function GO:0016207 4-coumarate-CoA ligase activity Molecular Function GO:0016405 CoA-ligase activity Molecular Function GO:0050563 trans-feruloyl-CoA synthase activity Molecular Function GO:0106286 (E)-caffeate-CoA ligase activity Molecular Function GO:0106290 trans-cinnamate-CoA ligase activity Molecular Function |
| KEGG gene cross-reference | nta:107797004 nta:107803673 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
No result was found for this query.
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.