Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1079 bp · LXL04_000986|LXL04_000986|OH1004|cDNA
TTGATCACTGGTCAACTGATACGTGGTAACAAACAACACGACGACCAGCCACGAGGCGCTTCAAATGAAGTGCTGCCTGGAACCCTTCTCTCCACTCTCTCGTTTCTCCACTGTTTGCAGACGATGGATGTTTCTTCCTTCTCCACGACCTCAAGGCGATGCTGGCTTCTTTCCTCAGCTGTAGATATGGTGCTACTCAAGAAACATGGTGTCTCTCAATGCTATCAAGGCTCTGTATCCATGTTGGATAATAAAATCAG...
1053 bp · LXL04_000986|LXL04_000986|OH1004|CDS
TTGATCACTGGTCAACTGATACGTGGTAACAAACAACACGACGACCAGCCACGAGGCGCTTCAAATGAAGTGCTGCCTGGAACCCTTCTCTCCACTCTCTCGTTTCTCCACTGTTTGCAGACGATGGATGTTTCTTCCTTCTCCACGACCTCAAGGCGATGCTGGCTTCTTTCCTCAGCTGTAGATATGGTGCTACTCAAGAAACATGGTGTCTCTCAATGCTATCAAGGCTCTGTATCCATGTTGGATAATAAAATCAG...
Protein
Download Protein FASTA350 aa · LXL04_000986|LXL04_000986|OH1004|PROTEIN
MITGQLIRGNKQHDDQPRGASNEVLPGTLLSTLSFLHCLQTMDVSSFSTTSRRCWLLSSAVDMVLLKKHGVSQCYQGSVSMLDNKIRSHPSINQSLFFRRKKYPVQVVCSQKKDIPIVEARSMDEIYDTLAERLVPSGTNTSMIHIVGLAGPPGAGKTTIASEVAKRVNKLWPEKTCAFDSQVEPPQIAVVLPMDGFHLYRHQLDSMEDPKEAHARRGAPWTFNPDLFLKCLKTLREQGSVYVPSFDHGVGDPVEDDIFI...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_000986 |
|---|---|
| TK1151 ID | TkA01G569170 |
| OH-1004 ID | LXL04_000986 |
| Relationship / confidence | Rbh High Identity Coverage Synteny / Strict |
| Protein identity (%) | 96.800 |
| Protein coverage (%) | TK1151 94.444 / OH-1004 96.857Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_000986 |
|---|---|
| Location | Chr01:17876984-17880509 (+) |
| Description | Similar to SPAC227.14: Putative uridine kinase C227.14 (Schizosaccharomyces pombe (strain 972 / ATCC 24843) |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0044206 UMP salvage Biological Process GO:0044211 CTP salvage Biological Process GO:0005634 nucleus Cellular Component GO:0005737 cytoplasm Cellular Component GO:0005829 cytosol Cellular Component GO:0004849 uridine kinase activity Molecular Function GO:0005524 ATP binding Molecular Function GO:0016301 kinase activity Molecular Function GO:0016887 ATP hydrolysis activity Molecular Function GO:0043771 cytidine kinase activity Molecular Function |
| KEGG gene cross-reference | ecj:JW2895 eco:b2928 ecoc:C3026_16040 vpo:Kpol_467p9 zro:ZYRO0F04752g These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF00485.25PRK146-349 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| LXL04_000986 | PF00485.25 | PRK | 146 | 349 | 2.2e-13 | 51.2 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.