Gene Card
Gene overview
cDNA / CDS / Protein Sequences
552 bp · LXL04_000134|LXL04_000134|OH1004|cDNA
ATGAACGGGAGAAGGAATCATGAAGACATAGTTCAAAGTCGCCGCAATAGATCGTCGCAGAATGTTGCCCTAGATTTAGACGCAACCATCCTTTTCCCTCTATTGTTTCCAAAGAAAAATCGAGTGCTCCTGATAAATACTTCCTCACCTCCGACGTCTCACTCACATTCGGCGACAAGCAGGATCGGAACTAACTGTGTGCTACCCCTTAGCATTGTGTCCTATGACGGGTTCCAAGTTATATCCCCATCGATCATCGA...
552 bp · LXL04_000134|LXL04_000134|OH1004|CDS
ATGAACGGGAGAAGGAATCATGAAGACATAGTTCAAAGTCGCCGCAATAGATCGTCGCAGAATGTTGCCCTAGATTTAGACGCAACCATCCTTTTCCCTCTATTGTTTCCAAAGAAAAATCGAGTGCTCCTGATAAATACTTCCTCACCTCCGACGTCTCACTCACATTCGGCGACAAGCAGGATCGGAACTAACTGTGTGCTACCCCTTAGCATTGTGTCCTATGACGGGTTCCAAGTTATATCCCCATCGATCATCGA...
Protein
Download Protein FASTA183 aa · LXL04_000134|LXL04_000134|OH1004|PROTEIN
MNGRRNHEDIVQSRRNRSSQNVALDLDATILFPLLFPKKNRVLLINTSSPPTSHSHSATSRIGTNCVLPLSIVSYDGFQVISPSIIEILSHSSNSASRRLYNASIAPYIGASYVKFFESAVARVSSPSLIVEKAGSNVWAHKSWRVGKEFARTVTSANLLFASTELPLQPKVSQDLQSIDLDK
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_000134 |
|---|---|
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_000134 | ||||||
|---|---|---|---|---|---|---|---|
| Location | Chr01:2956085-2958024 (-) | ||||||
| Description | Similar to CLASP: CLIP-associated protein | ||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | ||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | ||||||
| GO annotations (OH1004 source) | GO:0000226 microtubule cytoskeleton organization Biological Process GO:0000278 mitotic cell cycle Biological Process GO:0007026 negative regulation of microtubule depolymerization Biological Process GO:0009826 unidimensional cell growth Biological Process GO:0043622 cortical microtubule organization Biological Process GO:0050821 protein stabilization Biological Process GO:0051301 cell division Biological Process GO:0051781 positive regulation of cell division Biological Process GO:0005737 cytoplasm Cellular Component GO:0005739 mitochondrion Cellular Component GO:0005876 spindle microtubule Cellular Component GO:0005881 cytoplasmic microtubule Cellular Component | ||||||
| KEGG gene cross-reference | ath:AT2G20190 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
No result was found for this query.
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
| Protein | Organism | Description | Identity | Database | Confidence |
|---|---|---|---|---|---|
Q8RWY6 | Arabidopsis thaliana | CLIP-associated protein | 48.889% | Swiss-Prot | weak database homology |