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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDTkA06G027970
Query referenceTK1151
LocationChr06:7560902-7563979 (+)
DescriptionSimilar to IWS1: Protein IWS1 homolog 1 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_026091 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 14 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At1g32130 Transcription factor involved in RNA polymerase II (RNAPII) transcription regulation.
Arabidopsis IWS1 interacts with transcription factor BES1 and is involved in plant steroid hormone brassinosteroid regulated gene expression.2010 · DOI: 10.1073/pnas.0909198107
High nitrogen insensitive 9 (HNI9)-mediated systemic repression of root NO3- uptake is associated with changes in histone methylation.2011 · DOI: 10.1073/pnas.1017863108
At4g19000 Transcription factor involved in RNA polymerase II (RNAPII) transcription regulation. No verified direct reference in this release

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006338chromatin remodelingBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.296; coverage=52.662; evalue=6.01e-35; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006351DNA-templated transcriptionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.589; coverage=103.232; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006397mRNA processingBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.296; coverage=52.662; evalue=6.01e-35; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0008380RNA splicingBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.296; coverage=52.662; evalue=6.01e-35; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009742brassinosteroid mediated signaling pathwayBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.589; coverage=103.232; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010467gene expressionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.296; coverage=52.662; evalue=6.01e-35; UniProt GO evidence=ISO:RGDUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010793regulation of mRNA export from nucleusBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.296; coverage=52.662; evalue=6.01e-35; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016973poly(A)+ mRNA export from nucleusBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.296; coverage=52.662; evalue=6.01e-35; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0023052signalingBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.589; coverage=103.232; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0032784regulation of DNA-templated transcription elongationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.589; coverage=103.232; evalue=0.0; UniProt GO evidence=TAS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0050684regulation of mRNA processingBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.296; coverage=52.662; evalue=6.01e-35; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0140673transcription elongation-coupled chromatin remodelingBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.296; coverage=52.662; evalue=6.01e-35; UniProt GO evidence=ISO:RGDUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.589; coverage=103.232; evalue=0.0; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005654nucleoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.296; coverage=52.662; evalue=6.01e-35; UniProt GO evidence=ISO:RGDUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G32130KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.589; coverage=103.232; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGhsa:55677KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.559; coverage=51.711; evalue=1.02e-34UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGmmu:73473KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=33.824; coverage=51.711; evalue=3.94e-34UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGrno:291705KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.296; coverage=52.662; evalue=6.01e-35UniProtKB/Swiss-Prot DAT 2026 current_release