基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | TkA05G053170 |
|---|---|
| 当前查询版本 | TK1151 |
| 位置 | Chr05:14149363-14152853 (+) |
| 描述 | Similar to CPRF2: Light-inducible protein CPRF2 (Petroselinum crispum OX%3D4043) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_019474 · GCA_047496595.1_OSU_TarKok_2.0。此处为经 ID 对照查得的 OH1004 注释;下方拟南芥/水稻同源表使用当前查询参考的独立蛋白比对。
当前查询返回来自 OH1004 注释条目的 20 条 GO 注释和 5 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At5g28770 |
参与控制饥饿反应的转录因子。 | |
At4g02640 |
结合C-box样基序(5'-TGCTGACGTCA-3')和G-box样基序(5'-CCACGTGGCC-3')、基因启动子的ABRE元件的转录因子。 |
Synergistic activation of seed storage protein gene expression in Arabidopsis by ABI3 and two bZIPs related to OPAQUE2.2003 · DOI: 10.1074/jbc.m210538200 Combinatorial control of Arabidopsis proline dehydrogenase transcription by specific heterodimerisation of bZIP transcription factors.2006 · DOI: 10.1038/sj.emboj.7601206 bZIP10-LSD1 antagonism modulates basal defense and cell death in Arabidopsis following infection.2006 · DOI: 10.1038/sj.emboj.7601312
|
At3g54620 |
转录因子,结合 5'-ACGT-3' 底物,尤其存在于 G-box 样序列 (5'-CCACGTGGCC-3')、ABRE 元件及种子贮存蛋白 (SSP) 编码基因启动子 (例如) 中。 |
Synergistic activation of seed storage protein gene expression in Arabidopsis by ABI3 and two bZIPs related to OPAQUE2.2003 · DOI: 10.1074/jbc.m210538200
|
水稻
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
Os03g0796900 |
转录激活因子,能结合 α-球蛋白基因启动子中的 DNA 特异序列 5'-GCCACGT[AC]AG-3'。 | 暂无已核实直接文献 |
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0002240 | response to molecule of oomycetes origin | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=39.429; 覆盖度=75.431; E 值=2.6e-45; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006351 | DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=56.264; 覆盖度=98.06; E 值=4.7e-121; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009267 | cellular response to starvation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=40.089; 覆盖度=96.767; E 值=9.57e-77; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009626 | plant-type hypersensitive response | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=39.429; 覆盖度=75.431; E 值=2.6e-45; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009649 | entrainment of circadian clock | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=40.089; 覆盖度=96.767; E 值=9.57e-77; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045893 | positive regulation of DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=39.429; 覆盖度=75.431; E 值=2.6e-45; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071215 | cellular response to abscisic acid stimulus | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=40.089; 覆盖度=96.767; E 值=9.57e-77; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071333 | cellular response to glucose stimulus | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=40.089; 覆盖度=96.767; E 值=9.57e-77; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000693 | positive regulation of seed maturation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=39.429; 覆盖度=75.431; E 值=2.6e-45; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=56.264; 覆盖度=98.06; E 值=4.7e-121; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=39.429; 覆盖度=75.431; E 值=2.6e-45; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000976 | transcription cis-regulatory region binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=39.429; 覆盖度=75.431; E 值=2.6e-45; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=56.264; 覆盖度=98.06; E 值=4.7e-121; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003700 | DNA-binding transcription factor activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=56.264; 覆盖度=98.06; E 值=4.7e-121; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019900 | kinase binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=40.089; 覆盖度=96.767; E 值=9.57e-77; UniProt GO evidence=IPI:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042802 | identical protein binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=40.089; 覆盖度=96.767; E 值=9.57e-77; UniProt GO evidence=IPI:IntAct | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043565 | sequence-specific DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=39.429; 覆盖度=75.431; E 值=2.6e-45; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045735 | nutrient reservoir activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=39.429; 覆盖度=75.431; E 值=2.6e-45; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046982 | protein heterodimerization activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=40.089; 覆盖度=96.767; E 值=9.57e-77; UniProt GO evidence=IPI:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046983 | protein dimerization activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=56.264; 覆盖度=98.06; E 值=4.7e-121; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G54620 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=38.162; 覆盖度=77.371; E 值=2.97e-38 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G02640 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=39.429; 覆盖度=75.431; E 值=2.6e-45 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G28770 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=40.089; 覆盖度=96.767; E 值=9.57e-77 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os03g0796900 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=46.296; 覆盖度=69.828; E 值=2.82e-58 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | osa:4334424 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=46.296; 覆盖度=69.828; E 值=2.82e-58 | UniProtKB/Swiss-Prot DAT 2026 current_release |