基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | TkA04G440430 |
|---|---|
| 当前查询版本 | TK1151 |
| 位置 | Chr04:111100309-111102851 (-) |
| 描述 | Similar to SQE1: Squalene monooxygenase SE1 (Panax ginseng OX%3D4054) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_038537 · GCA_047496595.1_OSU_TarKok_2.0。此处为经 ID 对照查得的 OH1004 注释;下方拟南芥/水稻同源表使用当前查询参考的独立蛋白比对。
当前查询返回来自 OH1004 注释条目的 20 条 GO 注释和 3 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At2g22830 |
催化角鲨烯立体专一性氧化生成(S)-2,3-环氧角鲨烯,被认为是类固醇生物合成中的限速酶。 | |
At4g37760 |
可能催化角鲨烯立体特异性氧化为 (S)-2,3-环氧角鲨烯,参与甾醇生物合成。 | |
At1g58440 |
可能催化角鲨烯立体特异性氧化为 (S)-2,3-环氧角鲨烯,参与甾醇生物合成。 |
Arabidopsis thaliana squalene epoxidase 1 is essential for root and seed development.2007 · DOI: 10.1074/jbc.m611831200
|
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0002238 | response to molecule of fungal origin | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=68.023; 覆盖度=99.04; E 值=0.0; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009414 | response to water deprivation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=68.455; 覆盖度=89.443; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009611 | response to wounding | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=67.258; 覆盖度=97.313; E 值=0.0; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009723 | response to ethylene | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=68.023; 覆盖度=99.04; E 值=0.0; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009725 | response to hormone | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=66.602; 覆盖度=98.273; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009751 | response to salicylic acid | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=68.023; 覆盖度=99.04; E 值=0.0; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009753 | response to jasmonic acid | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=68.023; 覆盖度=99.04; E 值=0.0; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010038 | response to metal ion | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=68.023; 覆盖度=99.04; E 值=0.0; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016126 | sterol biosynthetic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=68.023; 覆盖度=99.04; E 值=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042542 | response to hydrogen peroxide | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=68.023; 覆盖度=99.04; E 值=0.0; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046246 | terpene biosynthetic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=68.023; 覆盖度=99.04; E 值=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071731 | response to nitric oxide | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=68.023; 覆盖度=99.04; E 值=0.0; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1902438 | response to vanadate(3-) | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=68.023; 覆盖度=99.04; E 值=0.0; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005576 | extracellular region | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=68.455; 覆盖度=89.443; E 值=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005783 | endoplasmic reticulum | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=73.002; 覆盖度=88.868; E 值=0.0; UniProt GO evidence=IEA:TreeGrafter | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005789 | endoplasmic reticulum membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=68.023; 覆盖度=99.04; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016020 | membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=73.002; 覆盖度=88.868; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031966 | mitochondrial membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=66.602; 覆盖度=98.273; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004506 | squalene monooxygenase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=68.023; 覆盖度=99.04; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050660 | flavin adenine dinucleotide binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=68.023; 覆盖度=99.04; E 值=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G58440 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=68.455; 覆盖度=89.443; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT2G22830 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=66.602; 覆盖度=98.273; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G37760 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=67.258; 覆盖度=97.313; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release |