基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | TkA04G328600 |
|---|---|
| 当前查询版本 | TK1151 |
| 位置 | Chr04:83008531-83012425 (-) |
| 描述 | Similar to LDL2: Lysine-specific histone demethylase 1 homolog 2 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_037604 · GCA_047496595.1_OSU_TarKok_2.0。此处为经 ID 对照查得的 OH1004 注释;下方拟南芥/水稻同源表使用当前查询参考的独立蛋白比对。
当前查询返回来自 OH1004 注释条目的 20 条 GO 注释和 5 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At3g13682 |
可能的组蛋白去甲基化酶,可降低花抑制因子 FLOWERING LOCUS C 和孢子体沉默的花抑制因子 FWA 染色质中组蛋白 H3 'Lys-4' 甲基化水平。 | |
At3g10390 |
可能的组蛋白去甲基化酶,通过抑制花控基因 C (FLC),一种阻止植物由营养生长转向生殖生长的花抑制因子,促进开花,独立于光周期和春化途径。 | 暂无已核实直接文献 |
水稻
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
Os08g0143400 |
可能的组蛋白去甲基化酶。 | 暂无已核实直接文献 |
Os04g0560300 |
可能的组蛋白去甲基化酶。 | 暂无已核实直接文献 |
UniProt: Q01H90 |
可能的组蛋白去甲基化酶。 | 暂无已核实直接文献 |
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006325 | chromatin organization | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=51.351; 覆盖度=98.479; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006351 | DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=61.325; 覆盖度=95.691; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009627 | systemic acquired resistance | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=48.98; 覆盖度=93.156; E 值=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010228 | vegetative to reproductive phase transition of meristem | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=48.98; 覆盖度=93.156; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045892 | negative regulation of DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=50.137; 覆盖度=92.522; E 值=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046208 | spermine catabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=51.351; 覆盖度=98.479; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048364 | root development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=50.137; 覆盖度=92.522; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048510 | regulation of timing of transition from vegetative to reproductive phase | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=48.98; 覆盖度=93.156; E 值=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1903602 | thermospermine catabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=51.351; 覆盖度=98.479; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1904629 | response to diterpene | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=48.98; 覆盖度=93.156; E 值=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000028 | regulation of photoperiodism, flowering | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=48.98; 覆盖度=93.156; E 值=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=50.137; 覆盖度=92.522; E 值=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=50.137; 覆盖度=92.522; E 值=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=61.325; 覆盖度=95.691; E 值=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=48.98; 覆盖度=93.156; E 值=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016491 | oxidoreductase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=61.325; 覆盖度=95.691; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032452 | histone demethylase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=48.98; 覆盖度=93.156; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042800 | histone H3K4 methyltransferase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=61.325; 覆盖度=95.691; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050660 | flavin adenine dinucleotide binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=51.351; 覆盖度=98.479; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0052901 | spermine oxidase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=51.351; 覆盖度=98.479; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G62830 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=50.137; 覆盖度=92.522; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G10390 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=48.98; 覆盖度=93.156; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G13682 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=61.325; 覆盖度=95.691; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os04g0560300 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=49.326; 覆盖度=94.043; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os08g0143400 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=51.351; 覆盖度=98.479; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release |