Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`TkA04G267310`
Query reference	TK1151
Location	Chr04:67555587-67561155 (-)
Description	Similar to FDS-2: Farnesyl diphosphate synthase 2 (Artemisia spiciformis OX%3D235357)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_037275 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 9 GO annotations and 0 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At4g26570`	Acts as a calcium sensor.	A protein kinase, calcineurin B-like protein-interacting protein Kinase9, interacts with calcium sensor calcineurin B-like Protein3 and regulates potassium homeostasis under low-potassium stress in Arabidopsis.2013 · DOI: 10.1104/pp.112.206896
`At5g55990`	Acts as a calcium sensor.	Arabidopsis protein kinase PKS5 inhibits the plasma membrane H+ -ATPase by preventing interaction with 14-3-3 protein.2007 · DOI: 10.1105/tpc.105.035626 S-acylation-dependent association of the calcium sensor CBL2 with the vacuolar membrane is essential for proper abscisic acid responses.2012 · DOI: 10.1038/cr.2012.71

Rice

Reference gene ID	Possible function	Papers / DOI
`Os03g0626800`	Acts as a calcium sensor.	No verified direct reference in this release
`Os12g0597000`	Acts as a calcium sensor.	A gibberellin-regulated calcineurin B in rice localizes to the tonoplast and is implicated in vacuole function.2005 · DOI: 10.1104/pp.105.062703
`Os12g0162400`	Acts as a calcium sensor.	No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0006695	cholesterol biosynthetic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=65.179; coverage=48.138; evalue=2e-142; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009739	response to gibberellin	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=65.465; coverage=47.708; evalue=6.27e-141; UniProt GO evidence=IEP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0033384	geranyl diphosphate biosynthetic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.262; coverage=48.138; evalue=1.19e-147; UniProt GO evidence=IEA:UniProtKB-UniPathway	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0045337	farnesyl diphosphate biosynthetic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.262; coverage=48.138; evalue=1.19e-147; UniProt GO evidence=IEA:UniProtKB-UniPathway	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005634	nucleus	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=65.465; coverage=47.708; evalue=6.27e-141; UniProt GO evidence=IEA:UniProtKB-SubCell	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005737	cytoplasm	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.262; coverage=48.138; evalue=1.19e-147; UniProt GO evidence=IEA:TreeGrafter	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0004161	dimethylallyltranstransferase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.262; coverage=48.138; evalue=1.19e-147; UniProt GO evidence=IEA:UniProtKB-EC	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0004337	(2E,6E)-farnesyl diphosphate synthase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.262; coverage=48.138; evalue=1.19e-147; UniProt GO evidence=IEA:UniProtKB-EC	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0046872	metal ion binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=67.262; coverage=48.138; evalue=1.19e-147; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release