Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA03G544470 |
|---|---|
| Query reference | TK1151 |
| Location | Chr03:137304613-137312365 (-) |
| Description | Similar to PYRD: Riboflavin biosynthesis protein PYRD%2C chloroplastic (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_010703 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 28 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At4g20960 |
Monofunctional pyrimidine deaminase involved in the riboflavin biosynthesis pathway. | |
At3g61350 |
F-box/kelch-repeat protein SKIP4. | No verified direct reference in this release |
At4g18950 |
Serine/threonine protein kinase that phosphorylates proteins on serine and threonine residues (By similarity). | No verified direct reference in this release |
At1g14000 |
Serine/threonine protein kinase which may function as an adapter protein for BRL2. | No verified direct reference in this release |
At2g43850 |
Functions as a link between plant defense pathways, stress responses and potassium homeostasis. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0007165 | signal transduction | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.117; coverage=32.083; evalue=2.63e-90; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007229 | integrin-mediated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.117; coverage=32.083; evalue=2.63e-90; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009231 | riboflavin biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.098; coverage=30.5; evalue=3.04e-122; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009409 | response to cold | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=48.023; coverage=29.5; evalue=1.33e-109; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009637 | response to blue light | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.117; coverage=32.083; evalue=2.63e-90; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009733 | response to auxin | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=41.232; coverage=35.167; evalue=9.71e-87; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009734 | auxin-activated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=41.232; coverage=35.167; evalue=9.71e-87; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009742 | brassinosteroid mediated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=41.232; coverage=35.167; evalue=9.71e-87; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010119 | regulation of stomatal movement | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.117; coverage=32.083; evalue=2.63e-90; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010305 | leaf vascular tissue pattern formation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=41.232; coverage=35.167; evalue=9.71e-87; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010828 | positive regulation of D-glucose transmembrane transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=41.232; coverage=35.167; evalue=9.71e-87; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016567 | protein ubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=48.023; coverage=29.5; evalue=1.33e-109; UniProt GO evidence=IEA:UniProtKB-UniPathway | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071333 | cellular response to glucose stimulus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=41.232; coverage=35.167; evalue=9.71e-87; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1902074 | response to salt | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=41.232; coverage=35.167; evalue=9.71e-87; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000325 | plant-type vacuole | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=41.232; coverage=35.167; evalue=9.71e-87; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005576 | extracellular region | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=41.232; coverage=35.167; evalue=9.71e-87; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.117; coverage=32.083; evalue=2.63e-90; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.117; coverage=32.083; evalue=2.63e-90; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.117; coverage=32.083; evalue=2.63e-90; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.098; coverage=30.5; evalue=3.04e-122; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009570 | chloroplast stroma | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.098; coverage=30.5; evalue=3.04e-122; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004672 | protein kinase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.117; coverage=32.083; evalue=2.63e-90; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004674 | protein serine/threonine kinase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.117; coverage=32.083; evalue=2.63e-90; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004709 | MAP kinase kinase kinase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=41.232; coverage=35.167; evalue=9.71e-87; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004712 | protein serine/threonine/tyrosine kinase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.117; coverage=32.083; evalue=2.63e-90; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.117; coverage=32.083; evalue=2.63e-90; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.098; coverage=30.5; evalue=3.04e-122; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008835 | diaminohydroxyphosphoribosylaminopyrimidine deaminase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.098; coverage=30.5; evalue=3.04e-122; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G14000 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=41.232; coverage=35.167; evalue=9.71e-87 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G61350 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=48.023; coverage=29.5; evalue=1.33e-109 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G18950 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.117; coverage=32.083; evalue=2.63e-90 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G20960 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.098; coverage=30.5; evalue=3.04e-122 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | zma:100191772 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=54.598; coverage=29.0; evalue=1.02e-113 | UniProtKB/Swiss-Prot DAT 2026 current_release |