Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA02G399160 |
|---|---|
| Query reference | TK1151 |
| Location | Chr02:101392306-101393568 (+) |
| Description | Similar to At5g26960: F-box/kelch-repeat protein At5g26960 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_014761 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 13 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At5g26960 |
F-box/kelch-repeat protein At5g26960. | No verified direct reference in this release |
At4g39590 |
F-box/kelch-repeat protein At4g39590. | No verified direct reference in this release |
At1g22040 |
F-box/kelch-repeat protein At1g22040. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006511 | ubiquitin-dependent protein catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.24; coverage=40.811; evalue=1.5e-09; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006995 | cellular response to nitrogen starvation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=23.871; coverage=73.986; evalue=9.35e-14; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010506 | regulation of autophagy | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.24; coverage=40.811; evalue=1.5e-09; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016567 | protein ubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.24; coverage=40.811; evalue=1.5e-09; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034599 | cellular response to oxidative stress | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.24; coverage=40.811; evalue=1.5e-09; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.24; coverage=40.811; evalue=1.5e-09; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071379 | cellular response to prostaglandin stimulus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.24; coverage=40.811; evalue=1.5e-09; UniProt GO evidence=IGI:ZFIN | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071466 | cellular response to xenobiotic stimulus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.24; coverage=40.811; evalue=1.5e-09; UniProt GO evidence=IGI:ZFIN | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.24; coverage=40.811; evalue=1.5e-09; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=26.645; coverage=72.554; evalue=7.94e-16; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016234 | inclusion body | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.24; coverage=40.811; evalue=1.5e-09; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031463 | Cul3-RING ubiquitin ligase complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.24; coverage=40.811; evalue=1.5e-09; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990756 | ubiquitin-like ligase-substrate adaptor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.24; coverage=40.811; evalue=1.5e-09; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G60570 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=29.018; coverage=53.461; evalue=3.01e-12 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G67480 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=23.871; coverage=73.986; evalue=9.35e-14 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G39590 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=26.645; coverage=72.554; evalue=7.94e-16 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G26960 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.195; coverage=100.477; evalue=6.41e-160 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dre:100003679 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.24; coverage=40.811; evalue=1.5e-09 | UniProtKB/Swiss-Prot DAT 2026 current_release |