Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_038766 |
|---|---|
| Query reference | OH1004 |
| Location | Chr09:49976953-49981323 (+) |
| Description | Similar to BOP1: Ribosome biogenesis protein BOP1 homolog (Oryza sativa subsp. japonica OX%3D39947) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_038766 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 19 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At2g40360 |
Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (By similarity). |
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os07g0435400 |
Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit. | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000027 | ribosomal large subunit assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=59.292; coverage=20.0; evalue=3.33e-36; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000448 | cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=59.292; coverage=20.0; evalue=3.33e-36; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000460 | maturation of 5.8S rRNA | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=59.292; coverage=20.0; evalue=3.33e-36; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000463 | maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.702; coverage=20.177; evalue=7.57e-59; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000466 | maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.702; coverage=20.177; evalue=7.57e-59; UniProt GO evidence=IEA:UniProtKB-UniRule | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006364 | rRNA processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=59.292; coverage=20.0; evalue=3.33e-36; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007276 | gamete generation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=78.261; coverage=20.354; evalue=1.89e-56; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008283 | cell population proliferation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=59.292; coverage=20.0; evalue=3.33e-36; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042273 | ribosomal large subunit biogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=59.292; coverage=20.0; evalue=3.33e-36; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051302 | regulation of cell division | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=78.261; coverage=20.354; evalue=1.89e-56; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051726 | regulation of cell cycle | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=59.292; coverage=20.0; evalue=3.33e-36; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=78.261; coverage=20.354; evalue=1.89e-56; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.702; coverage=20.177; evalue=7.57e-59; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005694 | chromosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=59.292; coverage=20.0; evalue=3.33e-36; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005730 | nucleolus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=78.261; coverage=20.354; evalue=1.89e-56; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030687 | preribosome, large subunit precursor | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.702; coverage=20.177; evalue=7.57e-59; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070545 | PeBoW complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.702; coverage=20.177; evalue=7.57e-59; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990904 | ribonucleoprotein complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=59.292; coverage=20.0; evalue=3.33e-36; UniProt GO evidence=ISO:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043021 | ribonucleoprotein complex binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.702; coverage=20.177; evalue=7.57e-59; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G40360 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=78.261; coverage=20.354; evalue=1.89e-56 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os07g0435400 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.702; coverage=20.177; evalue=7.57e-59 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mbr:MONBRDRAFT_37129 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.177; coverage=20.0; evalue=1.1e-38 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:12181 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=59.292; coverage=20.0; evalue=3.33e-36 | UniProtKB/Swiss-Prot DAT 2026 current_release |