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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_038463
Query referenceOH1004
LocationChr09:41785441-41790107 (-)
DescriptionSimilar to KATNB1: Katanin p80 WD40 repeat-containing subunit B1 (Strongylocentrotus purpuratus OX%3D7668)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_038463 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 18 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At4g34280 May act as a substrate receptor of a CUL4-RING E3 ubiquitin- protein ligase (CRL4) complex involved in the negative regulation of cellular responses to ultraviolet-B (UV-B) illumination, likely in coordination with RUP1.
DWD HYPERSENSITIVE TO UV-B 1 is negatively involved in UV-B mediated cellular responses in Arabidopsis.2014 · DOI: 10.1007/s11103-014-0247-0
DHU1 negatively regulates UV-B signaling via its direct interaction with COP1 and RUP1.2017 · DOI: 10.1016/j.bbrc.2017.07.110

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0007019microtubule depolymerizationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=23.894; coverage=27.73; evalue=4.36e-07; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010224response to UV-BBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.351; coverage=99.877; evalue=0.0; UniProt GO evidence=IEP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0051013microtubule severingBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=23.894; coverage=27.73; evalue=4.36e-07; UniProt GO evidence=IEA:UniProtKB-UniRuleUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0051301cell divisionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=23.894; coverage=27.73; evalue=4.36e-07; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0071493cellular response to UV-BBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.351; coverage=99.877; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000922spindle poleCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=23.894; coverage=27.73; evalue=4.36e-07; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.351; coverage=99.877; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005654nucleoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=26.238; coverage=24.785; evalue=5.95e-06; UniProt GO evidence=ISO:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005737cytoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=23.894; coverage=27.73; evalue=4.36e-07; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005739mitochondrionCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.351; coverage=99.877; evalue=0.0; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005813centrosomeCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=23.894; coverage=27.73; evalue=4.36e-07; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005819spindleCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=23.894; coverage=27.73; evalue=4.36e-07; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005874microtubuleCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=23.894; coverage=27.73; evalue=4.36e-07; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0008352katanin complexCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=23.894; coverage=27.73; evalue=4.36e-07; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048188Set1C/COMPASS complexCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=26.238; coverage=24.785; evalue=5.95e-06; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0080008Cul4-RING E3 ubiquitin ligase complexCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.351; coverage=99.877; evalue=0.0; UniProt GO evidence=IPI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0008017microtubule bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=23.894; coverage=27.73; evalue=4.36e-07; UniProt GO evidence=IEA:UniProtKB-UniRuleUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042393histone bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=26.238; coverage=24.785; evalue=5.95e-06; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT4G34280KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.351; coverage=99.877; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGgga:415631KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=26.752; coverage=19.264; evalue=3.06e-06UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGmmu:69544KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=26.238; coverage=24.785; evalue=5.95e-06UniProtKB/Swiss-Prot DAT 2026 current_release