Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_029219 |
|---|---|
| Query reference | OH1004 |
| Location | Chr06:83980502-83983653 (+) |
| Description | Similar to 4CLL6: 4-coumarate--CoA ligase-like 6 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_029219 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 15 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At4g19010 |
Contributes to jasmonic acid biosynthesis by initiating the beta-oxidative chain shortening of its precursors. |
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os08g0143300 |
Carboxylate--CoA ligase that may use 4-coumarate as substrate. | No verified direct reference in this release |
Os10g0578950 |
Carboxylate--CoA ligase that may use 4-coumarate as substrate. | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006744 | ubiquinone biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.374; coverage=87.418; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009698 | phenylpropanoid metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.374; coverage=87.418; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009753 | response to jasmonic acid | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=47.505; coverage=88.399; evalue=5.46e-170; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042617 | paclitaxel biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=47.505; coverage=88.399; evalue=5.46e-170; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005777 | peroxisome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.374; coverage=87.418; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005783 | endoplasmic reticulum | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=47.505; coverage=88.399; evalue=5.52e-169; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=47.505; coverage=88.399; evalue=5.46e-170; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.374; coverage=87.418; evalue=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.374; coverage=87.418; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016207 | 4-coumarate-CoA ligase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.374; coverage=87.418; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016405 | CoA-ligase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.374; coverage=87.418; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0018859 | 4-hydroxybenzoate-CoA ligase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.374; coverage=87.418; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050563 | trans-feruloyl-CoA synthase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.374; coverage=87.418; evalue=0.0; UniProt GO evidence=IEA:RHEA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0106286 | (E)-caffeate-CoA ligase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.374; coverage=87.418; evalue=0.0; UniProt GO evidence=IEA:RHEA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0106290 | trans-cinnamate-CoA ligase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.374; coverage=87.418; evalue=0.0; UniProt GO evidence=IEA:RHEA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ag:AKA59704 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=47.505; coverage=88.399; evalue=5.46e-170 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G19010 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.374; coverage=87.418; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os08g0143300 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=52.095; coverage=89.706; evalue=1.03e-180 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | osa:9269113 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=52.095; coverage=89.706; evalue=1.03e-180 | UniProtKB/Swiss-Prot DAT 2026 current_release |