基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_027923 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr06:26666387-26673868 (+) |
| 描述 | Similar to VPS15: Serine/threonine-protein kinase VPS15 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_027923 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 33 条 GO 注释和 3 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At4g29380 |
作为自噬特异性 VPS34 PI3-激酶复合物 I 的一部分,需要进行细胞质到液泡运输 (Cvt) 和自噬的丝氨酸/苏氨酸蛋白激酶 (通过相似性)。 |
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0000011 | vacuole inheritance | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=30.76; 覆盖度=55.304; E 值=3.05e-113; UniProt GO evidence=IMP:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000425 | pexophagy | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=64.771; 覆盖度=98.965; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006623 | protein targeting to vacuole | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=64.771; 覆盖度=98.965; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006914 | autophagy | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=30.76; 覆盖度=55.304; E 值=3.05e-113; UniProt GO evidence=IDA:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009555 | pollen development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=64.771; 覆盖度=98.965; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009846 | pollen germination | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=64.771; 覆盖度=98.965; E 值=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016236 | macroautophagy | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=32.302; 覆盖度=52.264; E 值=2.18e-116; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0023052 | signaling | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=32.931; 覆盖度=53.622; E 值=1.82e-115; UniProt GO evidence=NAS:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032968 | positive regulation of transcription elongation by RNA polymerase II | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=30.76; 覆盖度=55.304; E 值=3.05e-113; UniProt GO evidence=IMP:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042147 | retrograde transport, endosome to Golgi | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=32.931; 覆盖度=53.622; E 值=1.82e-115; UniProt GO evidence=ISO:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045053 | protein retention in Golgi apparatus | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=30.76; 覆盖度=55.304; E 值=3.05e-113; UniProt GO evidence=IMP:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045324 | late endosome to vacuole transport | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=64.771; 覆盖度=98.965; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046854 | phosphatidylinositol phosphate biosynthetic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=30.76; 覆盖度=55.304; E 值=3.05e-113; UniProt GO evidence=IDA:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051365 | cellular response to potassium ion starvation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=30.76; 覆盖度=55.304; E 值=3.05e-113; UniProt GO evidence=IMP:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000139 | Golgi membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=30.76; 覆盖度=55.304; E 值=3.05e-113; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=64.771; 覆盖度=98.965; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=30.76; 覆盖度=55.304; E 值=3.05e-113; UniProt GO evidence=HDA:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005770 | late endosome | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=64.771; 覆盖度=98.965; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005794 | Golgi apparatus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=64.771; 覆盖度=98.965; E 值=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=32.931; 覆盖度=53.622; E 值=1.82e-115; UniProt GO evidence=IEA:GOC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=64.771; 覆盖度=98.965; E 值=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005942 | phosphatidylinositol 3-kinase complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=64.771; 覆盖度=98.965; E 值=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010008 | endosome membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=64.771; 覆盖度=98.965; E 值=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034045 | phagophore assembly site membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=30.76; 覆盖度=55.304; E 值=3.05e-113; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034271 | phosphatidylinositol 3-kinase complex, class III, type I | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=64.771; 覆盖度=98.965; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034272 | phosphatidylinositol 3-kinase complex, class III, type II | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=64.771; 覆盖度=98.965; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071561 | nucleus-vacuole junction | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=64.771; 覆盖度=98.965; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0080008 | Cul4-RING E3 ubiquitin ligase complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=64.771; 覆盖度=98.965; E 值=0.0; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0120095 | vacuole-isolation membrane contact site | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=30.76; 覆盖度=55.304; E 值=3.05e-113; UniProt GO evidence=IDA:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004674 | protein serine/threonine kinase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=64.771; 覆盖度=98.965; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=64.771; 覆盖度=98.965; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043130 | ubiquitin binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=30.76; 覆盖度=55.304; E 值=3.05e-113; UniProt GO evidence=IDA:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0106310 | protein serine kinase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=64.771; 覆盖度=98.965; E 值=0.0; UniProt GO evidence=IEA:RHEA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT4G29380 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=64.771; 覆盖度=98.965; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | sce:YBR097W | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=30.76; 覆盖度=55.304; E 值=3.05e-113 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | spo:2539996 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=32.931; 覆盖度=53.622; E 值=1.82e-115 | UniProtKB/Swiss-Prot DAT 2026 current_release |