基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_027841 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr06:24608189-24609317 (-) |
| 描述 | Similar to VIP3: WD repeat-containing protein VIP3 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源：OH1004 · LXL04_027841 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 16 条 GO 注释和 5 条 KEGG 基因交叉引用；只下载当前查询结果，不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因；橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At4g29830 |
PAF1复合物（PAF1C）的组分，参与组蛋白修饰，如组蛋白H3第4位赖氨酸的甲基化（H3K4me3）。 |
Genetic analysis of early flowering mutants in Arabidopsis defines a class of pleiotropic developmental regulator required for expression of the flowering-time switch flowering locus C.2003 · DOI: 10.1093/genetics/164.1.347 Non conservation of the meiotic function of the Ski8/Rec103 homolog in Arabidopsis.2006 · DOI: 10.1111/j.1365-2443.2006.00972.x
|
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目，保留原始同源转移证据及覆盖度；其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006351 | DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=74.766; 覆盖度=100.312; E 值=3.71e-176; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006368 | transcription elongation by RNA polymerase II | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=37.975; 覆盖度=98.75; E 值=7.44e-68; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009908 | flower development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=74.766; 覆盖度=100.312; E 值=3.71e-176; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009910 | negative regulation of flower development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=74.766; 覆盖度=100.312; E 值=3.71e-176; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016441 | post-transcriptional gene silencing | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=74.766; 覆盖度=100.312; E 值=3.71e-176; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070478 | nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=37.975; 覆盖度=98.75; E 值=7.44e-68; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0072344 | rescue of stalled cytosolic ribosome | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=37.975; 覆盖度=98.75; E 值=7.44e-68; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1904278 | positive regulation of wax biosynthetic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=74.766; 覆盖度=100.312; E 值=3.71e-176; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000791 | euchromatin | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=37.975; 覆盖度=98.75; E 值=7.44e-68; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=74.766; 覆盖度=100.312; E 值=3.71e-176; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=74.766; 覆盖度=100.312; E 值=3.71e-176; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=74.766; 覆盖度=100.312; E 值=3.71e-176; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=74.766; 覆盖度=100.312; E 值=3.71e-176; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016593 | Cdc73/Paf1 complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=74.766; 覆盖度=100.312; E 值=3.71e-176; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0055087 | Ski complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=37.975; 覆盖度=98.75; E 值=7.44e-68; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0080008 | Cul4-RING E3 ubiquitin ligase complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=74.766; 覆盖度=100.312; E 值=3.71e-176; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT4G29830 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=74.766; 覆盖度=100.312; E 值=3.71e-176 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dre:393827 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=37.975; 覆盖度=98.75; E 值=7.44e-68 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | gga:415359 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=39.557; 覆盖度=98.75; E 值=1.77e-64 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | xla:444484 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=39.365; 覆盖度=98.438; E 值=4.52e-64 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | xtr:394466 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=39.683; 覆盖度=98.438; E 值=1.17e-65 | UniProtKB/Swiss-Prot DAT 2026 current_release |