Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_026947 |
|---|---|
| Query reference | OH1004 |
| Location | Chr06:5736442-5739492 (-) |
| Description | Similar to RLIM: E3 ubiquitin-protein ligase RLIM (Homo sapiens OX%3D9606) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_026947 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 34 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
No hit for this species in the current source table.
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os08g0104300 |
Involved in the trafficking of vacuolar proteins. | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000122 | negative regulation of transcription by RNA polymerase II | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=32.143; coverage=23.881; evalue=2e-12; UniProt GO evidence=IGI:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000209 | protein polyubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.465; coverage=9.168; evalue=2.61e-12; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006351 | DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=32.11; coverage=23.241; evalue=1.98e-12; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006511 | ubiquitin-dependent protein catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=32.11; coverage=23.241; evalue=1.98e-12; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015031 | protein transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.97; coverage=14.072; evalue=3.28e-12; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016567 | protein ubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=32.11; coverage=23.241; evalue=1.98e-12; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031669 | cellular response to nutrient levels | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.465; coverage=9.168; evalue=2.61e-12; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032418 | lysosome localization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.465; coverage=9.168; evalue=2.61e-12; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034198 | cellular response to amino acid starvation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.465; coverage=9.168; evalue=2.61e-12; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035519 | protein K29-linked ubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.465; coverage=9.168; evalue=2.61e-12; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045786 | negative regulation of cell cycle | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.465; coverage=9.168; evalue=2.61e-12; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045892 | negative regulation of DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=32.11; coverage=23.241; evalue=1.98e-12; UniProt GO evidence=NAS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051640 | organelle localization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=60.465; coverage=9.168; evalue=2.89e-12; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070534 | protein K63-linked ubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.465; coverage=9.168; evalue=2.61e-12; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0085020 | protein K6-linked ubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.465; coverage=9.168; evalue=2.61e-12; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1904262 | negative regulation of TORC1 signaling | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.465; coverage=9.168; evalue=2.61e-12; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1904263 | positive regulation of TORC1 signaling | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.465; coverage=9.168; evalue=2.61e-12; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990253 | cellular response to leucine starvation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.465; coverage=9.168; evalue=2.61e-12; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=32.11; coverage=23.241; evalue=1.98e-12; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=32.11; coverage=23.241; evalue=1.98e-12; UniProt GO evidence=IDA:HPA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.465; coverage=9.168; evalue=2.61e-12; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005764 | lysosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.465; coverage=9.168; evalue=2.61e-12; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005765 | lysosomal membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.465; coverage=9.168; evalue=2.61e-12; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005768 | endosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.465; coverage=9.168; evalue=2.61e-12; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=32.11; coverage=23.241; evalue=1.98e-12; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.465; coverage=9.168; evalue=2.61e-12; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0012505 | endomembrane system | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.97; coverage=14.072; evalue=3.28e-12; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0017053 | transcription repressor complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=32.11; coverage=23.241; evalue=1.98e-12; UniProt GO evidence=NAS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032586 | protein storage vacuole membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.97; coverage=14.072; evalue=3.28e-12; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0036020 | endolysosome membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.465; coverage=9.168; evalue=2.61e-12; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003714 | transcription corepressor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=32.11; coverage=23.241; evalue=1.98e-12; UniProt GO evidence=NAS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004842 | ubiquitin-protein transferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=32.11; coverage=23.241; evalue=1.98e-12; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=32.11; coverage=23.241; evalue=1.98e-12; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061630 | ubiquitin protein ligase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=32.11; coverage=23.241; evalue=1.98e-12; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | dosa:Os08g0104300 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.97; coverage=14.072; evalue=3.28e-12 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:26001 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=60.465; coverage=9.168; evalue=2.89e-12 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:51132 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=32.11; coverage=23.241; evalue=1.98e-12 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:19820 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=32.143; coverage=23.881; evalue=2e-12 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:70510 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.465; coverage=9.168; evalue=2.61e-12 | UniProtKB/Swiss-Prot DAT 2026 current_release |