Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_026609 |
|---|---|
| Query reference | OH1004 |
| Location | Chr05:129463362-129467876 (+) |
| Description | Similar to SEC16B: Protein transport protein SEC16B homolog (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_026609 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 16 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At5g47490 |
Required for protein transport from the endoplasmic reticulum to the Golgi apparatus. | No verified direct reference in this release |
At5g47480 |
Required for efficient protein export from the endoplasmic reticulum (ER) to the Golgi by regulating COPII coat dynamics at the ER. |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.043; coverage=116.241; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007029 | endoplasmic reticulum organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.043; coverage=116.241; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007031 | peroxisome organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=28.571; coverage=32.317; evalue=1.52e-31; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010628 | positive regulation of gene expression | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=28.571; coverage=32.317; evalue=1.52e-31; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015031 | protein transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.043; coverage=116.241; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016559 | peroxisome fission | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=28.571; coverage=32.317; evalue=1.52e-31; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070863 | positive regulation of protein exit from endoplasmic reticulum | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=28.571; coverage=32.317; evalue=1.52e-31; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070973 | protein localization to endoplasmic reticulum exit site | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.043; coverage=116.241; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000139 | Golgi membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=28.571; coverage=32.317; evalue=1.52e-31; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.043; coverage=116.241; evalue=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005789 | endoplasmic reticulum membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=28.571; coverage=32.317; evalue=1.52e-31; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005794 | Golgi apparatus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.043; coverage=116.241; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005795 | Golgi stack | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=44.496; coverage=105.606; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0012507 | ER to Golgi transport vesicle membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.043; coverage=116.241; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070971 | endoplasmic reticulum exit site | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.043; coverage=116.241; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043495 | protein-membrane adaptor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.043; coverage=116.241; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT5G47480 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=44.496; coverage=105.606; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G47490 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.043; coverage=116.241; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | gga:424431 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=25.464; coverage=48.887; evalue=3.57e-30 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:89867 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=28.571; coverage=32.317; evalue=1.52e-31 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | rno:89868 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=28.827; coverage=32.317; evalue=2.69e-31 | UniProtKB/Swiss-Prot DAT 2026 current_release |