基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_025453 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr05:112034604-112036115 (+) |
| 描述 | Similar to MYB4: Transcription factor MYB4 (Oryza sativa subsp. japonica OX%3D39947) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_025453 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 13 条 GO 注释和 6 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At2g31180 |
转录激活剂,通过影响 CBF 基因的表达来调节耐冻性。 | |
At1g79180 |
转录激活因子,结合 DNA 上的 AC 顺式元件 5'-ACCTACC-3'、5'-ACCAACC-3' 和 5'-ACCTAAC-3' 的启动子,并在 SND1 介导的次级细胞壁形成过程中特异性激活木质素生物合成基因。 | |
At3g23250 |
转录因子,参与CBF基因的低温调控以及抗冻能力的发育。 |
水稻
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
Os04g0517100 |
参与低温胁迫反应的转录激活因子。 |
Overexpression of the rice Osmyb4 gene increases chilling and freezing tolerance of Arabidopsis thaliana plants.2004 · DOI: 10.1046/j.1365-313x.2003.01938.x
|
Os02g0624300 |
作为耐冷性的负调控因子。 |
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006351 | DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.406; 覆盖度=60.181; E 值=1.43e-54; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009409 | response to cold | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.406; 覆盖度=60.181; E 值=1.43e-54; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009411 | response to UV | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=53.448; 覆盖度=78.733; E 值=1.17e-53; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009414 | response to water deprivation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=65.517; 覆盖度=52.489; E 值=1.24e-53; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009651 | response to salt stress | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=65.517; 覆盖度=52.489; E 值=1.24e-53; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009809 | lignin biosynthetic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=53.448; 覆盖度=78.733; E 值=1.17e-53; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045893 | positive regulation of DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.406; 覆盖度=60.181; E 值=1.43e-54; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050826 | response to freezing | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=66.387; 覆盖度=53.846; E 值=1.88e-54; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000652 | regulation of secondary cell wall biogenesis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=53.448; 覆盖度=78.733; E 值=1.17e-53; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.406; 覆盖度=60.181; E 值=1.43e-54; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000976 | transcription cis-regulatory region binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=66.387; 覆盖度=53.846; E 值=1.88e-54; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.406; 覆盖度=60.181; E 值=1.43e-54; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003700 | DNA-binding transcription factor activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=66.387; 覆盖度=53.846; E 值=1.88e-54; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G79180 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=53.448; 覆盖度=78.733; E 值=1.17e-53 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT2G31180 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=66.387; 覆盖度=53.846; E 值=1.88e-54 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G23250 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=65.517; 覆盖度=52.489; E 值=1.24e-53 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os02g0624300 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=65.517; 覆盖度=52.489; E 值=1.4e-53 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os04g0517100 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.406; 覆盖度=60.181; E 值=1.43e-54 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | osa:4330027 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=65.517; 覆盖度=52.489; E 值=1.4e-53 | UniProtKB/Swiss-Prot DAT 2026 current_release |