基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_018805 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr04:18474421-18482790 (-) |
| 描述 | Similar to IDM1: Increased DNA methylation 1 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_018805 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 22 条 GO 注释和 4 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At3g14980 |
组蛋白 H3 乙酰转移酶,在缺乏组蛋白 H3K4 二甲基化或三甲基化的染色质位点结合甲基化 DNA,并催化 H3K18 和 H3K23 乙酰化。 |
A histone acetyltransferase regulates active DNA demethylation in Arabidopsis.2012 · DOI: 10.1126/science.1219416
|
At5g28060 |
小核糖体亚基蛋白 eS24y。 | 暂无已核实直接文献 |
At3g04920 |
小核糖体亚基蛋白 eS24z。 | 暂无已核实直接文献 |
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0002181 | cytoplasmic translation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=88.43; 覆盖度=9.077; E 值=5.6e-67; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006351 | DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=37.236; 覆盖度=39.085; E 值=2.09e-99; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006412 | translation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=64.463; 覆盖度=9.077; E 值=8.11e-44; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0080188 | gene silencing by siRNA-directed DNA methylation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=37.236; 覆盖度=39.085; E 值=2.09e-99; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000325 | plant-type vacuole | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=90.909; 覆盖度=9.077; E 值=3.58e-60; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=37.236; 覆盖度=39.085; E 值=2.09e-99; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005730 | nucleolus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=90.909; 覆盖度=9.077; E 值=3.58e-60; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=88.43; 覆盖度=9.077; E 值=5.6e-67; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=90.909; 覆盖度=9.077; E 值=3.58e-60; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009505 | plant-type cell wall | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=88.43; 覆盖度=9.077; E 值=5.6e-67; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009506 | plasmodesma | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=37.236; 覆盖度=39.085; E 值=2.09e-99; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=90.909; 覆盖度=9.077; E 值=3.58e-60; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009536 | plastid | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=88.43; 覆盖度=9.077; E 值=5.6e-67; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0022626 | cytosolic ribosome | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=88.43; 覆盖度=9.077; E 值=5.6e-67; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0022627 | cytosolic small ribosomal subunit | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=88.43; 覆盖度=9.077; E 值=5.6e-67; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003729 | mRNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=88.43; 覆盖度=9.077; E 值=5.6e-67; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003735 | structural constituent of ribosome | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=88.43; 覆盖度=9.077; E 值=5.6e-67; UniProt GO evidence=IDA:CAFA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004402 | histone acetyltransferase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=37.236; 覆盖度=39.085; E 值=2.09e-99; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=37.236; 覆盖度=39.085; E 值=2.09e-99; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010385 | double-stranded methylated DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=37.236; 覆盖度=39.085; E 值=2.09e-99; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042393 | histone binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=37.236; 覆盖度=39.085; E 值=2.09e-99; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043993 | histone H3K18 acetyltransferase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=37.236; 覆盖度=39.085; E 值=2.09e-99; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G04920 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=90.909; 覆盖度=9.077; E 值=3.58e-60 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G14980 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=37.236; 覆盖度=39.085; E 值=2.09e-99 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G28060 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=88.43; 覆盖度=9.077; E 值=5.6e-67 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ddi:DDB_G0275473 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=66.667; 覆盖度=8.552; E 值=2.63e-43 | UniProtKB/Swiss-Prot DAT 2026 current_release |