Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_017279 |
|---|---|
| Query reference | OH1004 |
| Location | Chr03:144929003-144936055 (-) |
| Description | Similar to pol5: rDNA transcriptional regulator pol5 (Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX%3D284812) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_017279 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 34 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
No hit for this species in the current source table.
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000027 | ribosomal large subunit assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=24.429; coverage=32.982; evalue=7.16e-12; UniProt GO evidence=IDA:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006338 | chromatin remodeling | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=21.828; coverage=70.03; evalue=3.09e-19; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006351 | DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=21.828; coverage=70.03; evalue=3.09e-19; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006355 | regulation of DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=22.727; coverage=64.608; evalue=9.31e-27; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006364 | rRNA processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=22.727; coverage=64.608; evalue=9.31e-27; UniProt GO evidence=ISO:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009303 | rRNA transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=24.429; coverage=32.982; evalue=7.16e-12; UniProt GO evidence=IMP:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0022904 | respiratory electron transport chain | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=21.828; coverage=70.03; evalue=3.09e-19; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032922 | circadian regulation of gene expression | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=21.828; coverage=70.03; evalue=3.09e-19; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042149 | cellular response to glucose starvation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=21.828; coverage=70.03; evalue=3.09e-19; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042254 | ribosome biogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=21.828; coverage=70.03; evalue=3.09e-19; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045892 | negative regulation of DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=21.828; coverage=70.03; evalue=3.09e-19; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045943 | positive regulation of transcription by RNA polymerase I | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=21.828; coverage=70.03; evalue=3.09e-19; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045944 | positive regulation of transcription by RNA polymerase II | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=21.828; coverage=70.03; evalue=3.09e-19; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045945 | positive regulation of transcription by RNA polymerase III | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=21.828; coverage=70.03; evalue=3.09e-19; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090070 | positive regulation of ribosome biogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=24.429; coverage=32.982; evalue=7.16e-12; UniProt GO evidence=IDA:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1903450 | regulation of G1 to G0 transition | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=21.828; coverage=70.03; evalue=3.09e-19; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=22.727; coverage=64.608; evalue=9.31e-27; UniProt GO evidence=IDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=21.201; coverage=80.271; evalue=1.01e-16; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005730 | nucleolus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=22.727; coverage=64.608; evalue=9.31e-27; UniProt GO evidence=HDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=21.828; coverage=70.03; evalue=3.09e-19; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=22.727; coverage=64.608; evalue=9.31e-27; UniProt GO evidence=HDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016020 | membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=21.201; coverage=80.271; evalue=1.01e-16; UniProt GO evidence=HDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042564 | NLS-dependent protein nuclear import complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=21.828; coverage=70.03; evalue=3.09e-19; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0110016 | B-WICH complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=21.828; coverage=70.03; evalue=3.09e-19; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000166 | nucleotide binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=22.727; coverage=64.608; evalue=9.31e-27; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000182 | rDNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=22.727; coverage=64.608; evalue=9.31e-27; UniProt GO evidence=IDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0001163 | RNA polymerase I transcription regulatory region sequence-specific DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=22.727; coverage=64.608; evalue=9.31e-27; UniProt GO evidence=IDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003714 | transcription corepressor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=21.828; coverage=70.03; evalue=3.09e-19; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003723 | RNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=21.201; coverage=80.271; evalue=1.01e-16; UniProt GO evidence=HDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003887 | DNA-directed DNA polymerase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=24.429; coverage=32.982; evalue=7.16e-12; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=21.828; coverage=70.03; evalue=3.09e-19; UniProt GO evidence=TAS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042134 | rRNA primary transcript binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=24.429; coverage=32.982; evalue=7.16e-12; UniProt GO evidence=IDA:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043565 | sequence-specific DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=21.828; coverage=70.03; evalue=3.09e-19; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070888 | E-box binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=21.828; coverage=70.03; evalue=3.09e-19; UniProt GO evidence=IPI:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | hsa:10514 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=21.201; coverage=80.271; evalue=1.01e-16 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:18432 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=21.828; coverage=70.03; evalue=3.09e-19 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | rno:60571 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=21.063; coverage=38.253; evalue=2.33e-10 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | sce:YEL055C | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=24.429; coverage=32.982; evalue=7.16e-12 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | spo:2539834 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=22.727; coverage=64.608; evalue=9.31e-27 | UniProtKB/Swiss-Prot DAT 2026 current_release |