Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`LXL04_016201`
Query reference	OH1004
Location	Chr03:115011535-115018210 (-)
Description	Similar to GDPDL3: Glycerophosphodiester phosphodiesterase GDPDL3 (Arabidopsis thaliana OX%3D3702)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_016201 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 13 GO annotations and 2 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At4g26690`	Involved in primary cell wall organization.	The glycerophosphoryl diester phosphodiesterase-like proteins SHV3 and its homologs play important roles in cell wall organization.2008 · DOI: 10.1093/pcp/pcn120
`At5g55480`	Involved in primary cell wall organization.	The glycerophosphoryl diester phosphodiesterase-like proteins SHV3 and its homologs play important roles in cell wall organization.2008 · DOI: 10.1093/pcp/pcn120
`At1g66970`	Hydrolyzes glycerolphosphoglycerol, glycerophosphocholine and glycerophosphoethanolamine in vitro.	Characterization of the Arabidopsis glycerophosphodiester phosphodiesterase (GDPD) family reveals a role of the plastid-localized AtGDPD1 in maintaining cellular phosphate homeostasis under phosphate starvation.2011 · DOI: 10.1111/j.1365-313x.2011.04538.x
`At1g66980`	Atypical receptor-like kinase involved in disease resistance.	Activation of plant immune responses by a gain-of-function mutation in an atypical receptor-like kinase.2010 · DOI: 10.1104/pp.110.158501
`At3g20520`	Glycerophosphodiester phosphodiesterase GDPDL5.	No verified direct reference in this release

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0006071	glycerol metabolic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.904; coverage=37.194; evalue=7.34e-139; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006629	lipid metabolic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.904; coverage=37.194; evalue=7.34e-139; UniProt GO evidence=IEA:InterPro	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009932	cell tip growth	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.904; coverage=37.194; evalue=7.34e-139; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010053	root epidermal cell differentiation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.904; coverage=37.194; evalue=7.34e-139; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0048765	root hair cell differentiation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.904; coverage=37.194; evalue=7.34e-139; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0071555	cell wall organization	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.904; coverage=37.194; evalue=7.34e-139; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005829	cytosol	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.904; coverage=37.194; evalue=7.34e-139; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005886	plasma membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.904; coverage=37.194; evalue=7.34e-139; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009506	plasmodesma	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=44.672; coverage=39.804; evalue=1.39e-134; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009536	plastid	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=44.672; coverage=39.804; evalue=1.39e-134; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0016020	membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.904; coverage=37.194; evalue=7.34e-139; UniProt GO evidence=TAS:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0099503	secretory vesicle	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=44.672; coverage=39.804; evalue=1.39e-134; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0008889	glycerophosphodiester phosphodiesterase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.904; coverage=37.194; evalue=7.34e-139; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT4G26690	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.904; coverage=37.194; evalue=7.34e-139	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G55480	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=44.672; coverage=39.804; evalue=1.39e-134	UniProtKB/Swiss-Prot DAT 2026 current_release