Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_010117 |
|---|---|
| Query reference | OH1004 |
| Location | Chr02:140425729-140427042 (-) |
| Description | Similar to At1g55890: Pentatricopeptide repeat-containing protein At1g55890%2C mitochondrial (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_010117 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 9 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At1g55890 |
Small ribosomal subunit protein mS78 (rPPR3a). | No verified direct reference in this release |
At3g13150 |
Pentatricopeptide repeat-containing protein At3g13150. | No verified direct reference in this release |
At3g13160 |
Small ribosomal subunit protein mS79 (rPPR3b). | No verified direct reference in this release |
At1g61870 |
May be involved in translation through its association with polysomes. | No verified direct reference in this release |
At4g36680 |
Small ribosomal subunit protein mL103 (rPPR7). | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006396 | RNA processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=39.633; coverage=87.185; evalue=1.03e-92; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007005 | mitochondrion organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=39.633; coverage=87.185; evalue=1.03e-92; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=39.633; coverage=87.185; evalue=1.03e-92; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005743 | mitochondrial inner membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=33.841; coverage=75.057; evalue=3.55e-49; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.642; coverage=85.584; evalue=3.68e-90; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005840 | ribosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=39.633; coverage=87.185; evalue=1.03e-92; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990904 | ribonucleoprotein complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=39.633; coverage=87.185; evalue=1.03e-92; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000166 | nucleotide binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=33.841; coverage=75.057; evalue=3.55e-49; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003729 | mRNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=39.633; coverage=87.185; evalue=1.03e-92; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G55890 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=39.633; coverage=87.185; evalue=1.03e-92 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G61870 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=33.841; coverage=75.057; evalue=3.55e-49 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G13150 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.819; coverage=98.627; evalue=1.42e-88 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G13160 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.642; coverage=85.584; evalue=3.68e-90 | UniProtKB/Swiss-Prot DAT 2026 current_release |