基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_009765 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr02:132862069-132866107 (+) |
| 描述 | Similar to HDA18: Histone deacetylase 18 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源：OH1004 · LXL04_009765 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 63 条 GO 注释和 5 条 KEGG 基因交叉引用；只下载当前查询结果，不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因；橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At5g61070 |
催化核心组蛋白H2A、H2B、H3和H4的N端赖氨酸残基去乙酰化。 | |
At5g61060 |
负责核心组蛋白（H2A、H2B、H3 和 H4）N 端赖氨酸残基的去乙酰化（可能）。 |
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目，保留原始同源转移证据及覆盖度；其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0000122 | negative regulation of transcription by RNA polymerase II | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=56.79; 覆盖度=15.084; E 值=5.22e-20; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006325 | chromatin organization | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=56.79; 覆盖度=15.084; E 值=5.22e-20; UniProt GO evidence=TAS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006338 | chromatin remodeling | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=65.854; 覆盖度=15.27; E 值=1.78e-25; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006351 | DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=65.854; 覆盖度=15.27; E 值=1.78e-25; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008284 | positive regulation of cell population proliferation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=56.79; 覆盖度=15.084; E 值=5.79e-20; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008285 | negative regulation of cell population proliferation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=56.79; 覆盖度=15.084; E 值=5.79e-20; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009410 | response to xenobiotic stimulus | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=56.79; 覆盖度=15.084; E 值=5.79e-20; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009908 | flower development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=67.073; 覆盖度=15.27; E 值=6.02e-25; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010053 | root epidermal cell differentiation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=65.854; 覆盖度=15.27; E 值=1.78e-25; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010592 | positive regulation of lamellipodium assembly | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=56.79; 覆盖度=15.084; E 值=5.79e-20; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010882 | regulation of cardiac muscle contraction by calcium ion signaling | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=56.79; 覆盖度=15.084; E 值=5.79e-20; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010944 | negative regulation of transcription by competitive promoter binding | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=56.79; 覆盖度=15.084; E 值=5.79e-20; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0014894 | response to denervation involved in regulation of muscle adaptation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=56.79; 覆盖度=15.084; E 值=5.79e-20; UniProt GO evidence=IMP:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0014911 | positive regulation of smooth muscle cell migration | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=56.79; 覆盖度=15.084; E 值=5.79e-20; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0033235 | positive regulation of protein sumoylation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=56.79; 覆盖度=15.084; E 值=5.79e-20; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0040029 | epigenetic regulation of gene expression | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=65.854; 覆盖度=15.27; E 值=1.78e-25; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045814 | negative regulation of gene expression, epigenetic | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=67.073; 覆盖度=15.27; E 值=6.02e-25; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045820 | negative regulation of glycolytic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=56.79; 覆盖度=15.084; E 值=5.79e-20; UniProt GO evidence=IMP:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045892 | negative regulation of DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=56.79; 覆盖度=15.084; E 值=5.22e-20; UniProt GO evidence=TAS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045893 | positive regulation of DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=56.79; 覆盖度=15.084; E 值=5.79e-20; UniProt GO evidence=IMP:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045944 | positive regulation of transcription by RNA polymerase II | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=56.79; 覆盖度=15.084; E 值=5.79e-20; UniProt GO evidence=IMP:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048510 | regulation of timing of transition from vegetative to reproductive phase | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=67.073; 覆盖度=15.27; E 值=6.02e-25; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048661 | positive regulation of smooth muscle cell proliferation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=56.79; 覆盖度=15.084; E 值=5.79e-20; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050793 | regulation of developmental process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=65.854; 覆盖度=15.27; E 值=1.78e-25; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0060337 | type I interferon-mediated signaling pathway | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=56.79; 覆盖度=15.084; E 值=5.79e-20; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061084 | negative regulation of protein refolding | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=56.79; 覆盖度=15.084; E 值=5.79e-20; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070555 | response to interleukin-1 | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=56.79; 覆盖度=15.084; E 值=5.79e-20; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071260 | cellular response to mechanical stimulus | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=56.79; 覆盖度=15.084; E 值=6.17e-20; UniProt GO evidence=IEP:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071356 | cellular response to tumor necrosis factor | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=56.79; 覆盖度=15.084; E 值=6.17e-20; UniProt GO evidence=IEP:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071374 | cellular response to parathyroid hormone stimulus | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=56.79; 覆盖度=15.084; E 值=6.17e-20; UniProt GO evidence=IEP:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090558 | plant epidermis development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=65.854; 覆盖度=15.27; E 值=1.78e-25; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0097305 | response to alcohol | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=56.79; 覆盖度=15.084; E 值=6.17e-20; UniProt GO evidence=IEP:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1902894 | negative regulation of miRNA transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=56.79; 覆盖度=15.084; E 值=5.79e-20; UniProt GO evidence=IMP:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1903428 | positive regulation of reactive oxygen species biosynthetic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=56.79; 覆盖度=15.084; E 值=5.79e-20; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000118 | histone deacetylase complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=65.854; 覆盖度=15.27; E 值=1.78e-25; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000785 | chromatin | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=56.79; 覆盖度=15.084; E 值=5.79e-20; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=65.854; 覆盖度=15.27; E 值=1.78e-25; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=56.79; 覆盖度=15.084; E 值=5.79e-20; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=65.854; 覆盖度=15.27; E 值=1.78e-25; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=56.79; 覆盖度=15.084; E 值=5.79e-20; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016607 | nuclear speck | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=56.79; 覆盖度=15.084; E 值=5.79e-20; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0017053 | transcription repressor complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=56.79; 覆盖度=15.084; E 值=5.79e-20; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032991 | protein-containing complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=56.79; 覆盖度=15.084; E 值=5.79e-20; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042641 | actomyosin | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=56.79; 覆盖度=15.084; E 值=5.79e-20; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000978 | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=56.79; 覆盖度=15.084; E 值=5.79e-20; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0001216 | DNA-binding transcription activator activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=56.79; 覆盖度=15.084; E 值=5.79e-20; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=56.79; 覆盖度=15.084; E 值=5.79e-20; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003682 | chromatin binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=56.79; 覆盖度=15.084; E 值=5.79e-20; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003714 | transcription corepressor activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=56.79; 覆盖度=15.084; E 值=5.79e-20; UniProt GO evidence=IGI:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004407 | histone deacetylase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=65.854; 覆盖度=15.27; E 值=1.78e-25; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=65.854; 覆盖度=15.27; E 值=1.78e-25; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019789 | SUMO transferase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=56.79; 覆盖度=15.084; E 值=5.79e-20; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019901 | protein kinase binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=56.79; 覆盖度=15.084; E 值=5.79e-20; UniProt GO evidence=IPI:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030955 | potassium ion binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=56.79; 覆盖度=15.084; E 值=5.79e-20; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0033558 | protein lysine deacetylase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=56.79; 覆盖度=15.084; E 值=5.79e-20; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042802 | identical protein binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=56.79; 覆盖度=15.084; E 值=5.79e-20; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042826 | histone deacetylase binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=56.79; 覆盖度=15.084; E 值=5.79e-20; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046872 | metal ion binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=56.79; 覆盖度=15.084; E 值=5.22e-20; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0060090 | molecular adaptor activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=56.79; 覆盖度=15.084; E 值=5.79e-20; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061629 | RNA polymerase II-specific DNA-binding transcription factor binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=56.79; 覆盖度=15.084; E 值=5.79e-20; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140297 | DNA-binding transcription factor binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=56.79; 覆盖度=15.084; E 值=5.22e-20; UniProt GO evidence=TAS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0141221 | histone deacetylase activity, hydrolytic mechanism | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=65.854; 覆盖度=15.27; E 值=1.78e-25; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990841 | promoter-specific chromatin binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=56.79; 覆盖度=15.084; E 值=5.79e-20; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT5G61060 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=67.073; 覆盖度=15.27; E 值=6.02e-25 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G61070 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=65.854; 覆盖度=15.27; E 值=1.78e-25 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | gga:374207 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=56.79; 覆盖度=15.084; E 值=5.22e-20 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:208727 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=56.79; 覆盖度=15.084; E 值=5.79e-20 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | rno:363287 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=56.79; 覆盖度=15.084; E 值=6.17e-20 | UniProtKB/Swiss-Prot DAT 2026 current_release |