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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_006273
Query referenceOH1004
LocationChr02:5857892-5859616 (+)
DescriptionSimilar to HAT7: Homeobox-leucine zipper protein HAT7 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_006273 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 13 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At5g15150 Probable transcription factor. No verified direct reference in this release
At1g69780 Probable transcription factor that may act in the sucrose-signaling pathway. No verified direct reference in this release
At3g01220 Probable transcription factor. No verified direct reference in this release

Rice

Reference gene IDPossible functionPapers / DOI
Os03g0170600 Probable transcription factor. No verified direct reference in this release
UniProt: A2XD08 Probable transcription factor. No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006351DNA-templated transcriptionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.442; coverage=107.229; evalue=1.03e-61; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009733response to auxinBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=48.945; coverage=95.181; evalue=2.88e-59; UniProt GO evidence=IEP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009744response to sucroseBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=47.391; coverage=92.369; evalue=1.94e-60; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009965leaf morphogenesisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=47.391; coverage=92.369; evalue=1.94e-60; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0045893positive regulation of DNA-templated transcriptionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.442; coverage=107.229; evalue=1.03e-61; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048826cotyledon morphogenesisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=47.391; coverage=92.369; evalue=1.94e-60; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0080022primary root developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=47.391; coverage=92.369; evalue=1.94e-60; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.442; coverage=107.229; evalue=1.03e-61; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000976transcription cis-regulatory region bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=47.391; coverage=92.369; evalue=1.94e-60; UniProt GO evidence=IPI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000981DNA-binding transcription factor activity, RNA polymerase II-specificMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.442; coverage=107.229; evalue=1.03e-61; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003677DNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.442; coverage=107.229; evalue=1.03e-61; UniProt GO evidence=ISS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003700DNA-binding transcription factor activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.442; coverage=107.229; evalue=1.03e-61; UniProt GO evidence=ISS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0043565sequence-specific DNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.442; coverage=107.229; evalue=1.03e-61; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G69780KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=47.391; coverage=92.369; evalue=1.94e-60UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G01220KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=48.945; coverage=95.181; evalue=2.88e-59UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G15150KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.442; coverage=107.229; evalue=1.03e-61UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os03g0170600KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.928; coverage=110.843; evalue=2.65e-59UniProtKB/Swiss-Prot DAT 2026 current_release