Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_004581 |
|---|---|
| Query reference | OH1004 |
| Location | Chr01:140980457-140981419 (+) |
| Description | Similar to STOP2: Protein SENSITIVE TO PROTON RHIZOTOXICITY 2 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_004581 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 14 GO annotations and 6 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At5g22890 |
Probable transcription factor. | |
At1g34370 |
Probable transcription factor. |
Zinc finger protein STOP1 is critical for proton tolerance in Arabidopsis and coregulates a key gene in aluminum tolerance.2007 · DOI: 10.1073/pnas.0700117104 Aluminum-activated citrate and malate transporters from the MATE and ALMT families function independently to confer Arabidopsis aluminum tolerance.2009 · DOI: 10.1111/j.1365-313x.2008.03696.x
|
At5g60470 |
Probable transcription factor. | No verified direct reference in this release |
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os01g0871200 |
Probable transcription factor that may be involved in aluminum tolerance. | No verified direct reference in this release |
Os12g0170400 |
Transcriptional activator that regulates the expression of genes involved in aluminum (Al) tolerance. | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006351 | DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.637; coverage=98.125; evalue=2.12e-105; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006355 | regulation of DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.637; coverage=98.125; evalue=2.12e-105; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010044 | response to aluminum ion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.637; coverage=98.125; evalue=2.12e-105; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010447 | response to acidic pH | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.637; coverage=98.125; evalue=2.12e-105; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042542 | response to hydrogen peroxide | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.329; coverage=102.5; evalue=1.57e-73; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045893 | positive regulation of DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=38.365; coverage=99.375; evalue=2.16e-64; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071453 | cellular response to oxygen levels | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.329; coverage=102.5; evalue=1.57e-73; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071472 | cellular response to salt stress | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.329; coverage=102.5; evalue=1.57e-73; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1900037 | regulation of cellular response to hypoxia | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.329; coverage=102.5; evalue=1.57e-73; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.637; coverage=98.125; evalue=2.12e-105; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=33.557; coverage=46.562; evalue=2.57e-23; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003700 | DNA-binding transcription factor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.637; coverage=98.125; evalue=2.12e-105; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.637; coverage=98.125; evalue=2.12e-105; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043565 | sequence-specific DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.329; coverage=102.5; evalue=1.57e-73; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G34370 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.329; coverage=102.5; evalue=1.57e-73 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G22890 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.637; coverage=98.125; evalue=2.12e-105 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G60470 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=33.557; coverage=46.562; evalue=2.57e-23 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os01g0871200 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=62.5; coverage=50.0; evalue=2.8e-73 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os12g0170400 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=38.365; coverage=99.375; evalue=2.16e-64 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | osa:4324940 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=62.5; coverage=50.0; evalue=2.8e-73 | UniProtKB/Swiss-Prot DAT 2026 current_release |