Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_000788 |
|---|---|
| Query reference | OH1004 |
| Location | Chr01:14403404-14405699 (+) |
| Description | Similar to CHIP: E3 ubiquitin-protein ligase CHIP (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_000788 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 63 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At3g07370 |
Has E3 ubiquitin-protein ligase activity and may target misfolded substrates towards proteasomal degradation. |
AtCHIP, a U-box-containing E3 ubiquitin ligase, plays a critical role in temperature stress tolerance in Arabidopsis.2003 · DOI: 10.1104/pp.103.020800 AtCHIP functions as an E3 ubiquitin ligase of protein phosphatase 2A subunits and alters plant response to abscisic acid treatment.2006 · DOI: 10.1111/j.1365-313x.2006.02730.x The chloroplast protease subunit ClpP4 is a substrate of the E3 ligase AtCHIP and plays an important role in chloroplast function.2007 · DOI: 10.1111/j.1365-313x.2006.02963.x
|
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000165 | MAPK cascade | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=36.232; coverage=102.985; evalue=1.33e-50; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000209 | protein polyubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.669; coverage=103.731; evalue=9.52e-128; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0002931 | response to ischemia | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=36.232; coverage=102.985; evalue=1.33e-50; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006281 | DNA repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.101; coverage=103.358; evalue=3.97e-51; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006457 | protein folding | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=36.232; coverage=102.985; evalue=1.33e-50; UniProt GO evidence=TAS:HGNC-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006511 | ubiquitin-dependent protein catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.101; coverage=103.358; evalue=3.97e-51; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006513 | protein monoubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=36.232; coverage=102.985; evalue=1.33e-50; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006515 | protein quality control for misfolded or incompletely synthesized proteins | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.669; coverage=103.731; evalue=9.52e-128; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007165 | signal transduction | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.101; coverage=103.358; evalue=3.97e-51; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009266 | response to temperature stimulus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.669; coverage=103.731; evalue=9.52e-128; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009651 | response to salt stress | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.669; coverage=103.731; evalue=9.52e-128; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009737 | response to abscisic acid | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.669; coverage=103.731; evalue=9.52e-128; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010614 | negative regulation of cardiac muscle hypertrophy | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=36.232; coverage=102.985; evalue=1.33e-50; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016567 | protein ubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.669; coverage=103.731; evalue=9.52e-128; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030968 | endoplasmic reticulum unfolded protein response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=36.232; coverage=102.985; evalue=1.33e-50; UniProt GO evidence=IDA:ParkinsonsUK-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031398 | positive regulation of protein ubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=36.232; coverage=102.985; evalue=1.33e-50; UniProt GO evidence=IDA:ParkinsonsUK-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031647 | regulation of protein stability | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=36.232; coverage=102.985; evalue=1.33e-50; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031943 | regulation of glucocorticoid metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=36.232; coverage=102.985; evalue=1.33e-50; UniProt GO evidence=ISS:HGNC-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032436 | positive regulation of proteasomal ubiquitin-dependent protein catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=36.232; coverage=102.985; evalue=1.33e-50; UniProt GO evidence=ISS:HGNC-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034605 | cellular response to heat | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=36.232; coverage=102.985; evalue=1.33e-50; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035359 | negative regulation of peroxisome proliferator activated receptor signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=36.232; coverage=102.985; evalue=1.33e-50; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0036503 | ERAD pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=36.232; coverage=102.985; evalue=1.33e-50; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0038128 | ERBB2 signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=35.145; coverage=102.985; evalue=7.16e-49; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.669; coverage=103.731; evalue=9.52e-128; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045862 | positive regulation of proteolysis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.669; coverage=103.731; evalue=9.52e-128; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050821 | protein stabilization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=36.232; coverage=102.985; evalue=1.33e-50; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051865 | protein autoubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=36.232; coverage=102.985; evalue=1.33e-50; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061684 | chaperone-mediated autophagy | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=36.232; coverage=102.985; evalue=1.33e-50; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070534 | protein K63-linked ubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=36.232; coverage=102.985; evalue=1.33e-50; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071218 | cellular response to misfolded protein | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.669; coverage=103.731; evalue=9.52e-128; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071456 | cellular response to hypoxia | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=36.232; coverage=102.985; evalue=1.33e-50; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090035 | positive regulation of chaperone-mediated protein complex assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=36.232; coverage=102.985; evalue=1.33e-50; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1901526 | positive regulation of mitophagy | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=36.232; coverage=102.985; evalue=1.33e-50; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1904294 | positive regulation of ERAD pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=36.232; coverage=102.985; evalue=1.33e-50; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1904694 | negative regulation of vascular associated smooth muscle contraction | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=36.232; coverage=102.985; evalue=1.33e-50; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000151 | ubiquitin ligase complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=36.232; coverage=102.985; evalue=1.33e-50; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.101; coverage=103.358; evalue=3.97e-51; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=36.232; coverage=102.985; evalue=1.33e-50; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.669; coverage=103.731; evalue=9.52e-128; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.101; coverage=103.358; evalue=3.97e-51; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005783 | endoplasmic reticulum | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=36.232; coverage=102.985; evalue=1.33e-50; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=36.232; coverage=102.985; evalue=1.33e-50; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031371 | ubiquitin conjugating enzyme complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=36.232; coverage=102.985; evalue=1.33e-50; UniProt GO evidence=TAS:HGNC-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042405 | nuclear inclusion body | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=36.232; coverage=102.985; evalue=1.33e-50; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0101031 | protein folding chaperone complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=36.232; coverage=102.985; evalue=1.33e-50; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0001664 | G protein-coupled receptor binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=36.232; coverage=102.985; evalue=1.33e-50; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004842 | ubiquitin-protein transferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.669; coverage=103.731; evalue=9.52e-128; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019899 | enzyme binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=36.232; coverage=102.985; evalue=1.33e-50; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019900 | kinase binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=36.232; coverage=102.985; evalue=1.33e-50; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030544 | Hsp70 protein binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=36.232; coverage=102.985; evalue=1.33e-50; UniProt GO evidence=ISS:HGNC-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030674 | protein-macromolecule adaptor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=36.232; coverage=102.985; evalue=1.33e-50; UniProt GO evidence=TAS:HGNC-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030911 | TPR domain binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=36.232; coverage=102.985; evalue=1.33e-50; UniProt GO evidence=ISS:HGNC-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031072 | heat shock protein binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=36.232; coverage=102.985; evalue=1.33e-50; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031625 | ubiquitin protein ligase binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=36.232; coverage=102.985; evalue=1.33e-50; UniProt GO evidence=IPI:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034450 | ubiquitin-ubiquitin ligase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.101; coverage=103.358; evalue=3.97e-51; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042803 | protein homodimerization activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.101; coverage=103.358; evalue=3.97e-51; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046332 | SMAD binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=36.232; coverage=102.985; evalue=1.33e-50; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048156 | tau protein binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=35.145; coverage=102.985; evalue=7.16e-49; UniProt GO evidence=NAS:ARUK-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051087 | protein-folding chaperone binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.669; coverage=103.731; evalue=9.52e-128; UniProt GO evidence=IPI:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051787 | misfolded protein binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=36.232; coverage=102.985; evalue=1.33e-50; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051879 | Hsp90 protein binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=36.232; coverage=102.985; evalue=1.33e-50; UniProt GO evidence=ISS:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061630 | ubiquitin protein ligase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.669; coverage=103.731; evalue=9.52e-128; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070412 | R-SMAD binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=36.232; coverage=102.985; evalue=1.33e-50; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G07370 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.669; coverage=103.731; evalue=9.52e-128 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | gga:426918 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.101; coverage=103.358; evalue=3.97e-51 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:10273 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=35.145; coverage=102.985; evalue=7.16e-49 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:56424 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=36.232; coverage=102.985; evalue=1.33e-50 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | rno:287155 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.87; coverage=102.985; evalue=1.92e-49 | UniProtKB/Swiss-Prot DAT 2026 current_release |