基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | TkA07G038050 |
|---|---|
| 当前查询版本 | TK1151 |
| 位置 | Chr07:10087004-10093706 (+) |
| 描述 | Similar to JMJ25: Lysine-specific demethylase JMJ25 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_027178 · GCA_047496595.1_OSU_TarKok_2.0。此处为经 ID 对照查得的 OH1004 注释;下方拟南芥/水稻同源表使用当前查询参考的独立蛋白比对。
当前查询返回来自 OH1004 注释条目的 23 条 GO 注释和 4 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At4g21430 |
可能作为组蛋白 H3 赖氨酸去甲基化酶发挥作用,并参与基因表达的调控(通过相似性)。 | |
At1g62310 |
可能作为组蛋白H3赖氨酸去甲基化酶,参与基因表达调控。 | 暂无已核实直接文献 |
At1g11950 |
可能作为组蛋白H3赖氨酸去甲基化酶,参与基因表达调控。 | 暂无已核实直接文献 |
At4g00990 |
组蛋白去甲基酶,可去甲基化组蛋白H3的'Lys-9'(H3K9me),对H3K9me1和H3K9me2具有特异性活性。 | |
At1g09060 |
可能结合组蛋白 H3,但因无法结合 Fe²⁺ 而丧失去甲基化酶活性。 |
JMJ24 binds to RDR2 and is required for the basal level transcription of silenced loci in Arabidopsis.2015 · DOI: 10.1111/tpj.12924
|
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006351 | DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=33.03; 覆盖度=77.286; E 值=1e-118; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006357 | regulation of transcription by RNA polymerase II | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=33.29; 覆盖度=78.191; E 值=2.57e-128; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009414 | response to water deprivation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=33.29; 覆盖度=78.191; E 值=2.57e-128; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009617 | response to bacterium | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=33.29; 覆盖度=78.191; E 值=2.57e-128; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0040029 | epigenetic regulation of gene expression | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=33.29; 覆盖度=78.191; E 值=2.57e-128; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042742 | defense response to bacterium | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=33.29; 覆盖度=78.191; E 值=2.57e-128; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045815 | transcription initiation-coupled chromatin remodeling | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=32.25; 覆盖度=77.286; E 值=2.71e-113; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090333 | regulation of stomatal closure | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=33.29; 覆盖度=78.191; E 值=2.57e-128; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1902584 | positive regulation of response to water deprivation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=33.29; 覆盖度=78.191; E 值=2.57e-128; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000028 | regulation of photoperiodism, flowering | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=33.29; 覆盖度=78.191; E 值=2.57e-128; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000039 | regulation of trichome morphogenesis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=33.03; 覆盖度=77.286; E 值=1e-118; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000118 | histone deacetylase complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=33.29; 覆盖度=78.191; E 值=2.57e-128; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000785 | chromatin | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=33.29; 覆盖度=78.191; E 值=2.57e-128; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=33.29; 覆盖度=78.191; E 值=2.57e-128; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=33.29; 覆盖度=78.191; E 值=2.57e-128; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048188 | Set1C/COMPASS complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=32.77; 覆盖度=77.286; E 值=5.83e-127; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003712 | transcription coregulator activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=33.29; 覆盖度=78.191; E 值=2.57e-128; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=33.29; 覆盖度=78.191; E 值=2.57e-128; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016491 | oxidoreductase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=32.77; 覆盖度=77.286; E 值=5.83e-127; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031490 | chromatin DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=33.29; 覆盖度=78.191; E 值=2.57e-128; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032454 | histone H3K9 demethylase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=33.29; 覆盖度=78.191; E 值=2.57e-128; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043565 | sequence-specific DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=32.25; 覆盖度=77.286; E 值=2.71e-113; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140683 | histone H3K9me/H3K9me2 demethylase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=33.29; 覆盖度=78.191; E 值=2.57e-128; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G11950 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=32.77; 覆盖度=77.286; E 值=5.83e-127 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G62310 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=33.03; 覆盖度=77.286; E 值=1e-118 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G00990 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=33.29; 覆盖度=78.191; E 值=2.57e-128 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G21430 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=32.25; 覆盖度=77.286; E 值=2.71e-113 | UniProtKB/Swiss-Prot DAT 2026 current_release |