基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_027924 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr06:26673287-26676538 (-) |
| 描述 | Similar to LAMP1: Probable glutamate carboxypeptidase LAMP1 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_027924 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 28 条 GO 注释和 5 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At5g19740 |
与AMP1关联作用,在不依赖细胞分裂素信号通路的情况下抑制芽顶分生组织(SAM)中异位干细胞利基的形成。 | 暂无已核实直接文献 |
At3g54720 |
可能调节一种或多种在调节分生组织功能中发挥作用的小信号分子的水平。 |
A comparative analysis of the Arabidopsis mutant amp1-1 and a novel weak amp1 allele reveals new functions of the AMP1 protein.2007 · DOI: 10.1007/s00425-006-0395-9 AMP1 and MP antagonistically regulate embryo and meristem development in Arabidopsis.2007 · DOI: 10.1242/dev.006759 ALTERED MERISTEM PROGRAM 1 is involved in development of seed dormancy in Arabidopsis.2011 · DOI: 10.1371/journal.pone.0020408 Arabidopsis ALTERED MERISTEM PROGRAM 1 negatively modulates plant responses to abscisic acid and dehydration stress.2013 · DOI: 10.1016/j.plaphy.2013.03.016
|
水稻
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
Os03g0790600 |
参与侧器官形成的规律计时。 |
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006508 | proteolysis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=64.088; 覆盖度=96.888; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009640 | photomorphogenesis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=41.365; 覆盖度=101.556; E 值=1.76e-180; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009793 | embryo development ending in seed dormancy | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=41.365; 覆盖度=101.556; E 值=1.76e-180; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009908 | flower development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=41.365; 覆盖度=101.556; E 值=1.76e-180; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010073 | meristem maintenance | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=64.088; 覆盖度=96.888; E 值=0.0; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010074 | maintenance of meristem identity | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=43.382; 覆盖度=96.181; E 值=1.52e-170; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010075 | regulation of meristem growth | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=64.088; 覆盖度=96.888; E 值=0.0; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010080 | regulation of floral meristem growth | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=41.365; 覆盖度=101.556; E 值=1.76e-180; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010081 | regulation of inflorescence meristem growth | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=41.365; 覆盖度=101.556; E 值=1.76e-180; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010082 | regulation of root meristem growth | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=41.365; 覆盖度=101.556; E 值=1.76e-180; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010305 | leaf vascular tissue pattern formation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=41.365; 覆盖度=101.556; E 值=1.76e-180; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048364 | root development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=41.365; 覆盖度=101.556; E 值=1.76e-180; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048507 | meristem development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=41.365; 覆盖度=101.556; E 值=1.76e-180; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050793 | regulation of developmental process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=42.398; 覆盖度=96.747; E 值=1.6e-157; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090693 | plant organ senescence | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=41.365; 覆盖度=101.556; E 值=1.76e-180; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000034 | regulation of seed maturation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=43.382; 覆盖度=96.181; E 值=1.52e-170; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005773 | vacuole | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=64.088; 覆盖度=96.888; E 值=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005783 | endoplasmic reticulum | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=64.088; 覆盖度=96.888; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005789 | endoplasmic reticulum membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=64.088; 覆盖度=96.888; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=64.088; 覆盖度=96.888; E 值=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016020 | membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=41.365; 覆盖度=101.556; E 值=1.76e-180; UniProt GO evidence=NAS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004180 | carboxypeptidase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=64.088; 覆盖度=96.888; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004181 | metallocarboxypeptidase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=64.088; 覆盖度=96.888; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008236 | serine-type peptidase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=37.106; 覆盖度=98.727; E 值=9.63e-141; UniProt GO evidence=NAS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008239 | dipeptidyl-peptidase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=37.106; 覆盖度=98.727; E 值=9.63e-141; UniProt GO evidence=NAS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016805 | dipeptidase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=37.106; 覆盖度=98.727; E 值=9.63e-141; UniProt GO evidence=NAS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046872 | metal ion binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=64.088; 覆盖度=96.888; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050129 | N-formylglutamate deformylase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=37.106; 覆盖度=98.727; E 值=9.63e-141; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G54720 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=41.365; 覆盖度=101.556; E 值=1.76e-180 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G19740 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=64.088; 覆盖度=96.888; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os03g0790600 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=42.398; 覆盖度=96.747; E 值=1.6e-157 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:10003 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=37.106; 覆盖度=98.727; E 值=9.63e-141 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | zma:100147738 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=43.382; 覆盖度=96.181; E 值=1.52e-170 | UniProtKB/Swiss-Prot DAT 2026 current_release |