RubberDandelionOmics 橡胶草多组学网站
更多
转录组数据查询 注释 橡胶合成 转录因子预测 靶基因 蛋白关联网络 重测序 工具 下载
ZH EN

本页使用教程

基因注释

展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。

示例 TkA01G624900 LXL04_000258 文献示例 LXL04_039733 TkAUNG001940

查询结果

下载当前结果

基因 IDLXL04_027604
当前查询版本OH1004
位置Chr06:19973708-19982325 (+)
描述Similar to NRPE1: DNA-directed RNA polymerase V subunit 1 (Arabidopsis thaliana OX%3D3702)
注释来源组装GCA_047496595.1_OSU_TarKok_2.0

功能注释来源：OH1004 · LXL04_027604 · GCA_047496595.1_OSU_TarKok_2.0。

当前查询返回来自 OH1004 注释条目的 45 条 GO 注释和 5 条 KEGG 基因交叉引用；只下载当前查询结果，不据此推断 KEGG 通路成员。

拟南芥 / 水稻参考基因与文献

文献对应拟南芥或水稻参考基因；橡胶草的功能关联来自当前参考组装的蛋白序列比对。

下载当前基因文献

拟南芥

参考基因 ID可能功能对应论文 / DOI
At2g40030 DNA 依赖性 RNA 聚合酶使用四种核糖核苷三磷酸作为底物催化 DNA 转录为 RNA。
Atypical RNA polymerase subunits required for RNA-directed DNA methylation.2005 · DOI: 10.1038/ng1580
Reinforcement of silencing at transposons and highly repeated sequences requires the concerted action of two distinct RNA polymerases IV in Arabidopsis.2005 · DOI: 10.1101/gad.348405
The Arabidopsis chromatin-modifying nuclear siRNA pathway involves a nucleolar RNA processing center.2006 · DOI: 10.1016/j.cell.2006.05.031
PolIVb influences RNA-directed DNA methylation independently of its role in siRNA biogenesis.2008 · DOI: 10.1073/pnas.0709632105
NRPD1a and NRPD1b are required to maintain post-transcriptional RNA silencing and RNA-directed DNA methylation in Arabidopsis.2008 · DOI: 10.1111/j.1365-313x.2008.03525.x

水稻

当前来源表未检出该物种的同源命中。

GO / KEGG

以下 GO/KEGG 注释源自上述 OH1004 注释条目，保留原始同源转移证据及覆盖度；其来源物种范围与拟南芥/水稻直接比对表不同。

类型ID名称命名空间证据来源
GOGO:0006351DNA-templated transcription生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=47.653; 覆盖度=101.135; E 值=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006353DNA-templated transcription termination生物过程Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=24.027; 覆盖度=45.098; E 值=4.73e-52; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006355regulation of DNA-templated transcription生物过程Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=24.027; 覆盖度=45.098; E 值=4.73e-52; UniProt GO evidence=NAS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006366transcription by RNA polymerase II生物过程Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=24.027; 覆盖度=45.098; E 值=4.73e-52; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006367transcription initiation at RNA polymerase II promoter生物过程Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=26.359; 覆盖度=43.653; E 值=3.2e-57; UniProt GO evidence=IDA:PomBaseUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006368transcription elongation by RNA polymerase II生物过程Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=26.359; 覆盖度=43.653; E 值=3.2e-57; UniProt GO evidence=TAS:PomBaseUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006369termination of RNA polymerase II transcription生物过程Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=26.359; 覆盖度=43.653; E 值=3.2e-57; UniProt GO evidence=IMP:PomBaseUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:00063707-methylguanosine mRNA capping生物过程Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=26.359; 覆盖度=43.653; E 值=3.2e-57; UniProt GO evidence=TAS:PomBaseUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0019985translesion synthesis生物过程Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=25.297; 覆盖度=43.447; E 值=6.67e-53; UniProt GO evidence=IEA:EnsemblFungiUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0030422siRNA processing生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=47.653; 覆盖度=101.135; E 值=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0030643intracellular phosphate ion homeostasis生物过程Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=26.359; 覆盖度=43.653; E 值=3.2e-57; UniProt GO evidence=IMP:PomBaseUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0033120positive regulation of RNA splicing生物过程Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=24.027; 覆盖度=45.098; E 值=4.73e-52; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0035194regulatory ncRNA-mediated post-transcriptional gene silencing生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=47.653; 覆盖度=101.135; E 值=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042789mRNA transcription by RNA polymerase II生物过程Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=26.359; 覆盖度=43.653; E 值=3.2e-57; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0050832defense response to fungus生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=47.653; 覆盖度=101.135; E 值=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0180034co-transcriptional lncRNA 3' end processing, cleavage and polyadenylation pathway生物过程Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=26.359; 覆盖度=43.653; E 值=3.2e-57; UniProt GO evidence=IMP:PomBaseUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000418RNA polymerase IV complex细胞组分Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=47.653; 覆盖度=101.135; E 值=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000419RNA polymerase V complex细胞组分Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=47.653; 覆盖度=101.135; E 值=0.0; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000785chromatin细胞组分Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=26.359; 覆盖度=43.653; E 值=3.2e-57; UniProt GO evidence=IDA:PomBaseUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000791euchromatin细胞组分Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=24.027; 覆盖度=45.098; E 值=4.31e-52; UniProt GO evidence=IEA:EnsemblUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleus细胞组分Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=47.653; 覆盖度=101.135; E 值=0.0; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005654nucleoplasm细胞组分Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=24.027; 覆盖度=45.098; E 值=4.73e-52; UniProt GO evidence=TAS:ReactomeUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005665RNA polymerase II, core complex细胞组分Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=26.359; 覆盖度=43.653; E 值=3.2e-57; UniProt GO evidence=IDA:PomBaseUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005694chromosome细胞组分Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=24.027; 覆盖度=45.098; E 值=4.73e-52; UniProt GO evidence=IDA:UniProtUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005730nucleolus细胞组分Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=47.653; 覆盖度=101.135; E 值=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005737cytoplasm细胞组分Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=24.027; 覆盖度=45.098; E 值=4.73e-52; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005829cytosol细胞组分Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=24.027; 覆盖度=45.098; E 值=4.31e-52; UniProt GO evidence=IEA:EnsemblUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016591RNA polymerase II, holoenzyme细胞组分Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=26.359; 覆盖度=43.653; E 值=3.2e-57; UniProt GO evidence=EXP:PomBaseUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016604nuclear body细胞组分Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=47.653; 覆盖度=101.135; E 值=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0030880RNA polymerase complex细胞组分Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=47.653; 覆盖度=101.135; E 值=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000287magnesium ion binding分子功能Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=24.027; 覆盖度=45.098; E 值=4.31e-52; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0001046core promoter sequence-specific DNA binding分子功能Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=24.027; 覆盖度=45.098; E 值=4.31e-52; UniProt GO evidence=IEA:EnsemblUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003677DNA binding分子功能Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=47.653; 覆盖度=101.135; E 值=0.0; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003723RNA binding分子功能Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=24.027; 覆盖度=45.098; E 值=4.73e-52; UniProt GO evidence=HDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003899DNA-directed RNA polymerase activity分子功能Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=47.653; 覆盖度=101.135; E 值=0.0; UniProt GO evidence=ISS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003968RNA-directed RNA polymerase activity分子功能Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=25.297; 覆盖度=43.447; E 值=6.67e-53; UniProt GO evidence=IEA:EnsemblFungiUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0008270zinc ion binding分子功能Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=24.027; 覆盖度=45.098; E 值=4.31e-52; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016787hydrolase activity分子功能Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=24.027; 覆盖度=45.098; E 值=4.31e-52; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0019900kinase binding分子功能Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=24.027; 覆盖度=45.098; E 值=4.73e-52; UniProt GO evidence=IPI:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0031625ubiquitin protein ligase binding分子功能Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=24.027; 覆盖度=45.098; E 值=4.73e-52; UniProt GO evidence=IPI:BHF-UCLUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0046872metal ion binding分子功能Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=47.653; 覆盖度=101.135; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0050436microfibril binding分子功能Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=24.027; 覆盖度=45.098; E 值=4.73e-52; UniProt GO evidence=IDA:DisProtUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0071667DNA/RNA hybrid binding分子功能Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=24.027; 覆盖度=45.098; E 值=4.31e-52; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0140463chromatin-protein adaptor activity分子功能Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=26.359; 覆盖度=43.653; E 值=3.2e-57; UniProt GO evidence=IDA:PomBaseUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:1990841promoter-specific chromatin binding分子功能Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=24.027; 覆盖度=45.098; E 值=4.73e-52; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGago:AGOS_ADR086CKEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed 同源转移; 命中排序=3; 一致性=25.297; 覆盖度=43.447; E 值=6.67e-53UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT2G40030KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed 同源转移; 命中排序=1; 一致性=47.653; 覆盖度=101.135; E 值=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGbta:282312KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed 同源转移; 命中排序=4; 一致性=24.027; 覆盖度=45.098; E 值=4.31e-52UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGhsa:5430KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed 同源转移; 命中排序=5; 一致性=24.027; 覆盖度=45.098; E 值=4.73e-52UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGspo:2540292KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed 同源转移; 命中排序=2; 一致性=26.359; 覆盖度=43.653; E 值=3.2e-57UniProtKB/Swiss-Prot DAT 2026 current_release