基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_014507 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr03:51249279-51253664 (-) |
| 描述 | Similar to At2g32000: DNA topoisomerase 3-beta (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_014507 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 17 条 GO 注释和 5 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At2g32000 |
通过暂时切割并重新连接DNA双链的一条链,释放DNA复制和转录过程中引入的超螺旋和扭转应力。 | 暂无已核实直接文献 |
水稻
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
Os09g0500600 |
通过暂时切割并重新连接DNA双链的一条链,释放DNA复制和转录过程中引入的超螺旋和扭转应力。 | 暂无已核实直接文献 |
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006265 | DNA topological change | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=73.666; 覆盖度=100.583; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006281 | DNA repair | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=73.666; 覆盖度=100.583; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006310 | DNA recombination | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=73.666; 覆盖度=100.583; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007059 | chromosome segregation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=53.679; 覆盖度=96.733; E 值=0.0; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045727 | positive regulation of translation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=48.422; 覆盖度=96.149; E 值=0.0; UniProt GO evidence=IMP:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0141194 | siRNA-mediated heterochromatin formation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=48.422; 覆盖度=96.149; E 值=0.0; UniProt GO evidence=IGI:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000793 | condensed chromosome | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=53.679; 覆盖度=96.733; E 值=0.0; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005576 | extracellular region | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=73.666; 覆盖度=100.583; E 值=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=73.666; 覆盖度=100.583; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140225 | DNA topoisomerase III-beta-TDRD3 complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=53.679; 覆盖度=96.733; E 值=0.0; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=73.666; 覆盖度=100.583; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003723 | RNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=53.197; 覆盖度=96.733; E 值=0.0; UniProt GO evidence=HDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003729 | mRNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=73.666; 覆盖度=100.583; E 值=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003916 | DNA topoisomerase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=53.197; 覆盖度=96.733; E 值=0.0; UniProt GO evidence=TAS:ProtInc | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003917 | DNA topoisomerase type I (single strand cut, ATP-independent) activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=73.666; 覆盖度=100.583; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046872 | metal ion binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=73.666; 覆盖度=100.583; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140226 | RNA topoisomerase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=53.679; 覆盖度=96.733; E 值=0.0; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G32000 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=73.666; 覆盖度=100.583; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dme:Dmel_CG3458 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=48.422; 覆盖度=96.149; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os09g0500600 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=72.402; 覆盖度=101.05; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:8940 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=53.197; 覆盖度=96.733; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:21976 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=53.679; 覆盖度=96.733; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release |