基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_001106 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr01:20387155-20388549 (-) |
| 描述 | Similar to At3g63000: NPL4-like protein 1 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源：OH1004 · LXL04_001106 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 28 条 GO 注释和 5 条 KEGG 基因交叉引用；只下载当前查询结果，不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因；橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At3g63000 |
可能是一个复合物的一部分，该复合物结合泛素化蛋白，并且对于将错误折叠的蛋白从内质网输出到胞质以便被蛋白酶体降解是必要的（相似性推测）。 | 暂无已核实直接文献 |
At2g47970 |
可能是一个复合物的一部分，该复合物结合泛素化蛋白，并且对于将错误折叠的蛋白从内质网输出到胞质以便被蛋白酶体降解是必要的（相似性推测）。 | 暂无已核实直接文献 |
水稻
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
Os01g0377700 |
可能是结合泛素化蛋白的复合物的一部分，这一复合物对于将错误折叠的蛋白从内质网输出到胞质非常必要，在胞质中这些蛋白被蛋白酶体降解。 | 暂无已核实直接文献 |
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目，保留原始同源转移证据及覆盖度；其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006511 | ubiquitin-dependent protein catabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=69.512; 覆盖度=99.757; E 值=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007030 | Golgi organization | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=27.445; 覆盖度=77.129; E 值=7.69e-18; UniProt GO evidence=ISS:HGNC-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010498 | proteasomal protein catabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=69.512; 覆盖度=99.757; E 值=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030970 | retrograde protein transport, ER to cytosol | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=35.379; 覆盖度=67.397; E 值=2.19e-34; UniProt GO evidence=ISS:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032480 | negative regulation of type I interferon production | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=27.445; 覆盖度=77.129; E 值=7.69e-18; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034614 | cellular response to reactive oxygen species | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=69.512; 覆盖度=99.757; E 值=0.0; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0036503 | ERAD pathway | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=27.445; 覆盖度=77.129; E 值=7.69e-18; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0039536 | negative regulation of RIG-I signaling pathway | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=27.445; 覆盖度=77.129; E 值=7.69e-18; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=69.512; 覆盖度=99.757; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-UniPathway | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0072344 | rescue of stalled cytosolic ribosome | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=27.445; 覆盖度=77.129; E 值=7.69e-18; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1902882 | regulation of response to oxidative stress | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=69.512; 覆盖度=99.757; E 值=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990116 | ribosome-associated ubiquitin-dependent protein catabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=27.445; 覆盖度=77.129; E 值=7.69e-18; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=69.512; 覆盖度=99.757; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=27.445; 覆盖度=77.129; E 值=7.69e-18; UniProt GO evidence=IDA:HPA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=69.512; 覆盖度=99.757; E 值=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005783 | endoplasmic reticulum | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=57.995; 覆盖度=101.946; E 值=1.21e-172; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=69.417; 覆盖度=100.243; E 值=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009707 | chloroplast outer membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=69.512; 覆盖度=99.757; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034098 | VCP-NPL4-UFD1 AAA ATPase complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=27.445; 覆盖度=77.129; E 值=7.69e-18; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0036501 | UFD1-NPL4 complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=27.445; 覆盖度=77.129; E 值=7.69e-18; UniProt GO evidence=IPI:ParkinsonsUK-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042175 | nuclear outer membrane-endoplasmic reticulum membrane network | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=35.379; 覆盖度=67.397; E 值=2.19e-34; UniProt GO evidence=ISS:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=27.445; 覆盖度=77.129; E 值=7.69e-18; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031625 | ubiquitin protein ligase binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=69.512; 覆盖度=99.757; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0036435 | K48-linked polyubiquitin modification-dependent protein binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=27.445; 覆盖度=77.129; E 值=7.69e-18; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043130 | ubiquitin binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=69.512; 覆盖度=99.757; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0044877 | protein-containing complex binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=27.445; 覆盖度=77.129; E 值=7.69e-18; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051117 | ATPase binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=27.445; 覆盖度=77.129; E 值=7.69e-18; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070530 | K63-linked polyubiquitin modification-dependent protein binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=27.445; 覆盖度=77.129; E 值=7.69e-18; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G47970 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=69.417; 覆盖度=100.243; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G63000 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=69.512; 覆盖度=99.757; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ddi:DDB_G0290227 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=35.379; 覆盖度=67.397; E 值=2.19e-34 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os01g0377700 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=57.995; 覆盖度=101.946; E 值=1.21e-172 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:55666 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=27.445; 覆盖度=77.129; E 值=7.69e-18 | UniProtKB/Swiss-Prot DAT 2026 current_release |