Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA06G072930 |
|---|---|
| Query reference | TK1151 |
| Location | Chr06:19553226-19558554 (-) |
| Description | Similar to ISE2: DExH-box ATP-dependent RNA helicase DExH15 chloroplastic (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_025234 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 26 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At1g70060 |
Acts as a transcriptional repressor. | No verified direct reference in this release |
At1g24190 |
Acts as a transcriptional repressor. | |
At5g15020 |
Acts as a transcriptional repressor. | No verified direct reference in this release |
At1g59890 |
Acts as a transcriptional repressor. | No verified direct reference in this release |
At1g10450 |
Acts as a transcriptional repressor. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000122 | negative regulation of transcription by RNA polymerase II | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.56; coverage=32.858; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000373 | Group II intron splicing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.792; coverage=47.526; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000712 | resolution of meiotic recombination intermediates | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.792; coverage=47.526; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006351 | DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.56; coverage=32.858; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006397 | mRNA processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.792; coverage=47.526; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009737 | response to abscisic acid | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.56; coverage=32.858; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009793 | embryo development ending in seed dormancy | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.792; coverage=47.526; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010497 | plasmodesmata-mediated intercellular transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.792; coverage=47.526; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016441 | post-transcriptional gene silencing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.792; coverage=47.526; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016554 | cytidine to uridine editing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.792; coverage=47.526; evalue=0.0; UniProt GO evidence=IMP:CACAO | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031047 | regulatory ncRNA-mediated gene silencing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.792; coverage=47.526; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045892 | negative regulation of DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.56; coverage=32.858; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1901259 | chloroplast rRNA processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.792; coverage=47.526; evalue=0.0; UniProt GO evidence=IMP:CACAO | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000118 | histone deacetylase complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.56; coverage=32.858; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000785 | chromatin | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.56; coverage=32.858; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.792; coverage=47.526; evalue=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.792; coverage=47.526; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009570 | chloroplast stroma | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.792; coverage=47.526; evalue=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010494 | cytoplasmic stress granule | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.792; coverage=47.526; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070822 | Sin3-type complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.56; coverage=32.858; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003714 | transcription corepressor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.56; coverage=32.858; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003723 | RNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.792; coverage=47.526; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003724 | RNA helicase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.792; coverage=47.526; evalue=0.0; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003729 | mRNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.792; coverage=47.526; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.792; coverage=47.526; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016887 | ATP hydrolysis activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.792; coverage=47.526; evalue=0.0; UniProt GO evidence=IEA:RHEA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G24190 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.56; coverage=32.858; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G70060 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=49.1; coverage=34.686; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G70070 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.792; coverage=47.526; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release |