Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA01G554330 |
|---|---|
| Query reference | TK1151 |
| Location | Chr01:139404637-139406797 (-) |
| Description | Similar to ACL5: Thermospermine synthase ACAULIS5 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_001217 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 11 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At5g19530 |
Required for correct xylem specification through regulation of the lifetime of the xylem elements. |
ACAULIS5, an Arabidopsis gene required for stem elongation, encodes a spermine synthase.2000 · DOI: 10.1093/emboj/19.16.4248
|
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006596 | polyamine biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.976; coverage=99.11; evalue=4.32e-159; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008295 | spermidine biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=44.681; coverage=83.68; evalue=3.88e-66; UniProt GO evidence=IEA:UniProtKB-UniRule | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009926 | auxin polar transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.976; coverage=99.11; evalue=4.32e-159; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010087 | phloem or xylem histogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.976; coverage=99.11; evalue=4.32e-159; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048759 | xylem vessel member cell differentiation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.976; coverage=99.11; evalue=4.32e-159; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.976; coverage=99.11; evalue=4.32e-159; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.976; coverage=99.11; evalue=4.32e-159; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004766 | spermidine synthase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=44.681; coverage=83.68; evalue=3.88e-66; UniProt GO evidence=IEA:UniProtKB-UniRule | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010487 | thermospermine synthase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.976; coverage=99.11; evalue=4.32e-159; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016768 | spermine synthase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.976; coverage=99.11; evalue=4.32e-159; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050314 | sym-norspermidine synthase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=44.681; coverage=83.68; evalue=3.88e-66; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ape:APE_0767.1 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=39.13; coverage=88.724; evalue=9.38e-65 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G19530 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.976; coverage=99.11; evalue=4.32e-159 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hbu:Hbut_0383 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=44.681; coverage=83.68; evalue=3.88e-66 | UniProtKB/Swiss-Prot DAT 2026 current_release |