Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA01G004090 |
|---|---|
| Query reference | TK1151 |
| Location | Chr01:1070353-1073960 (+) |
| Description | Similar to At5g45370: WAT1-related protein At5g45370 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_005968 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 20 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At3g45870 |
WAT1-related protein At3g45870. | No verified direct reference in this release |
At4g19185 |
WAT1-related protein At4g19185. | No verified direct reference in this release |
At5g45370 |
WAT1-related protein At5g45370. | No verified direct reference in this release |
At1g75500 |
Required for secondary wall formation in fibers, especially in short days conditions. |
Walls are thin 1 (WAT1), an Arabidopsis homolog of Medicago truncatula NODULIN21, is a tonoplast-localized protein required for secondary wall formation in fibers.2010 · DOI: 10.1111/j.1365-313x.2010.04256.x
|
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000162 | L-tryptophan biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=36.364; coverage=100.268; evalue=3.97e-79; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006952 | defense response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=36.364; coverage=100.268; evalue=3.97e-79; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009734 | auxin-activated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=36.364; coverage=100.268; evalue=3.97e-79; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009826 | unidimensional cell growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=36.364; coverage=100.268; evalue=3.97e-79; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009834 | plant-type secondary cell wall biogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=36.364; coverage=100.268; evalue=3.97e-79; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009851 | auxin biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=36.364; coverage=100.268; evalue=3.97e-79; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010315 | auxin export across the plasma membrane | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=36.364; coverage=100.268; evalue=3.97e-79; UniProt GO evidence=IMP:CACAO | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071555 | cell wall organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=36.364; coverage=100.268; evalue=3.97e-79; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090355 | positive regulation of auxin metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=36.364; coverage=100.268; evalue=3.97e-79; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090358 | positive regulation of L-tryptophan metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=36.364; coverage=100.268; evalue=3.97e-79; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000325 | plant-type vacuole | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=36.364; coverage=100.268; evalue=3.97e-79; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005576 | extracellular region | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=63.307; coverage=103.753; evalue=1.97e-160; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.758; coverage=90.885; evalue=7.25e-77; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=63.307; coverage=103.753; evalue=1.97e-160; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005794 | Golgi apparatus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=63.307; coverage=103.753; evalue=1.97e-160; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.324; coverage=99.196; evalue=1.13e-164; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005938 | cell cortex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.758; coverage=90.885; evalue=7.25e-77; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.324; coverage=99.196; evalue=1.13e-164; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009705 | plant-type vacuole membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=36.364; coverage=100.268; evalue=3.97e-79; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0022857 | transmembrane transporter activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.324; coverage=99.196; evalue=1.13e-164; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G75500 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=36.364; coverage=100.268; evalue=3.97e-79 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G45870 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=72.256; coverage=87.936; evalue=3.14e-159 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G19185 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=63.307; coverage=103.753; evalue=1.97e-160 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G45370 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.324; coverage=99.196; evalue=1.13e-164 | UniProtKB/Swiss-Prot DAT 2026 current_release |