Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`LXL04_032488`
Query reference	OH1004
Location	Chr07:24039249-24042057 (-)
Description	Similar to NPF1.2: Protein NRT1/ PTR FAMILY 1.2 (Arabidopsis thaliana OX%3D3702)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_032488 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 16 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At1g52190`	Low-affinity nitrate transporter involved in xylem-to-phloem transfer for redistributing nitrate into developing leaves.	Two phloem nitrate transporters, NRT1.11 and NRT1.12, are important for redistributing xylem-borne nitrate to enhance plant growth.2013 · DOI: 10.1104/pp.113.226563
`At3g16180`	Low-affinity nitrate transporter involved in xylem-to-phloem transfer for redistributing nitrate into developing leaves.	No verified direct reference in this release
`At1g69870`	Low-affinity proton-dependent nitrate transporter.	The Arabidopsis nitrate transporter NRT1.7, expressed in phloem, is responsible for source-to-sink remobilization of nitrate.2009 · DOI: 10.1105/tpc.109.067603
`At5g62680`	High-affinity, proton-dependent glucosinolate-specific transporter.	NRT/PTR transporters are essential for translocation of glucosinolate defence compounds to seeds.2012 · DOI: 10.1038/nature11285 Integration of biosynthesis and long-distance transport establish organ-specific glucosinolate profiles in vegetative Arabidopsis.2013 · DOI: 10.1105/tpc.113.110890
`At1g18880`	Low-affinity nitrate transporter facilitating nitrate loading into root phloem.	Arabidopsis nitrate transporter NRT1.9 is important in phloem nitrate transport.2011 · DOI: 10.1105/tpc.111.083618

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0010233	phloem transport	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=34.118; coverage=102.586; evalue=2.86e-119; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0015706	nitrate transmembrane transport	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=45.085; coverage=101.724; evalue=4.06e-178; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0042128	nitrate assimilation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.676; coverage=97.931; evalue=2.71e-125; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0055085	transmembrane transport	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=45.085; coverage=101.724; evalue=4.06e-178; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0090408	phloem nitrate loading	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=34.118; coverage=102.586; evalue=2.86e-119; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0090449	phloem glucosinolate loading	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.314; coverage=101.552; evalue=2.16e-124; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:1901349	glucosinolate transport	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.314; coverage=101.552; evalue=2.16e-124; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005634	nucleus	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=45.085; coverage=101.724; evalue=4.06e-178; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005886	plasma membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=45.085; coverage=101.724; evalue=4.06e-178; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009506	plasmodesma	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.314; coverage=101.552; evalue=2.16e-124; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009507	chloroplast	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.676; coverage=97.931; evalue=2.71e-125; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0015112	nitrate transmembrane transporter activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=34.118; coverage=102.586; evalue=2.86e-119; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0015293	symporter activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.676; coverage=97.931; evalue=2.71e-125; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0022857	transmembrane transporter activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=45.085; coverage=101.724; evalue=4.06e-178; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0080054	low-affinity nitrate transmembrane transporter activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=45.085; coverage=101.724; evalue=4.06e-178; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0090448	glucosinolate:proton symporter activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.314; coverage=101.552; evalue=2.16e-124; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT1G18880	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=34.118; coverage=102.586; evalue=2.86e-119	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT1G52190	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=45.085; coverage=101.724; evalue=4.06e-178	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT1G69870	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.676; coverage=97.931; evalue=2.71e-125	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT3G16180	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=44.662; coverage=96.897; evalue=1.47e-169	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G62680	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.314; coverage=101.552; evalue=2.16e-124	UniProtKB/Swiss-Prot DAT 2026 current_release