Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_028549 |
|---|---|
| Query reference | OH1004 |
| Location | Chr06:45364223-45369948 (-) |
| Description | Similar to PMIR2: Protein PLASTID MOVEMENT IMPAIRED 1-RELATED 2 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_028549 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 15 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At5g26160 |
Seems not necessary for chloroplast and nuclear photorelocation movements. | |
At5g20610 |
Together with PMI1, necessary for chloroplast and nuclear photorelocation movements via the regulation of chloroplast-actin (cp- actin) filaments in pavement cells. | |
At1g42550 |
Necessary for chloroplast and nuclear photorelocation movements via the regulation of chloroplast-actin (cp-actin) filaments in mesophyll cells, and together with PMIR1, in pavement cells. |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006970 | response to osmotic stress | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=21.893; coverage=100.237; evalue=1.75e-26; UniProt GO evidence=TAS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009637 | response to blue light | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.881; coverage=47.924; evalue=2.03e-51; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009738 | abscisic acid-activated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=21.893; coverage=100.237; evalue=1.75e-26; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009787 | regulation of abscisic acid-activated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=21.893; coverage=100.237; evalue=1.75e-26; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009902 | chloroplast relocation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.881; coverage=47.924; evalue=2.03e-51; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009903 | chloroplast avoidance movement | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.881; coverage=47.924; evalue=2.03e-51; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010029 | regulation of seed germination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=21.893; coverage=100.237; evalue=1.75e-26; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030048 | actin filament-based movement | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.881; coverage=47.924; evalue=2.03e-51; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031022 | nuclear migration along microfilament | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.881; coverage=47.924; evalue=2.03e-51; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1902265 | abscisic acid homeostasis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=21.893; coverage=100.237; evalue=1.75e-26; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=32.0; coverage=115.658; evalue=5.92e-118; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.881; coverage=47.924; evalue=2.03e-51; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=21.893; coverage=100.237; evalue=1.75e-26; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=21.893; coverage=100.237; evalue=1.75e-26; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=21.893; coverage=100.237; evalue=1.75e-26; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G42550 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=21.893; coverage=100.237; evalue=1.75e-26 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G20610 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.881; coverage=47.924; evalue=2.03e-51 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G26160 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=32.0; coverage=115.658; evalue=5.92e-118 | UniProtKB/Swiss-Prot DAT 2026 current_release |