Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_027924 |
|---|---|
| Query reference | OH1004 |
| Location | Chr06:26673287-26676538 (-) |
| Description | Similar to LAMP1: Probable glutamate carboxypeptidase LAMP1 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_027924 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 28 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At5g19740 |
Acts in association with AMP1 to suppress ectopic stem cell niche formation in the shoot apical meristem (SAM) independently of cytokinin signaling pathway. | No verified direct reference in this release |
At3g54720 |
May modulate the level of one or more small signaling molecules that have a role in regulating meristem function. |
A comparative analysis of the Arabidopsis mutant amp1-1 and a novel weak amp1 allele reveals new functions of the AMP1 protein.2007 · DOI: 10.1007/s00425-006-0395-9 AMP1 and MP antagonistically regulate embryo and meristem development in Arabidopsis.2007 · DOI: 10.1242/dev.006759 ALTERED MERISTEM PROGRAM 1 is involved in development of seed dormancy in Arabidopsis.2011 · DOI: 10.1371/journal.pone.0020408 Arabidopsis ALTERED MERISTEM PROGRAM 1 negatively modulates plant responses to abscisic acid and dehydration stress.2013 · DOI: 10.1016/j.plaphy.2013.03.016
|
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os03g0790600 |
Involved in the regular timing (plastochron) of lateral organs formation. |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006508 | proteolysis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.088; coverage=96.888; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009640 | photomorphogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=41.365; coverage=101.556; evalue=1.76e-180; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009793 | embryo development ending in seed dormancy | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=41.365; coverage=101.556; evalue=1.76e-180; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009908 | flower development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=41.365; coverage=101.556; evalue=1.76e-180; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010073 | meristem maintenance | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.088; coverage=96.888; evalue=0.0; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010074 | maintenance of meristem identity | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=43.382; coverage=96.181; evalue=1.52e-170; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010075 | regulation of meristem growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.088; coverage=96.888; evalue=0.0; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010080 | regulation of floral meristem growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=41.365; coverage=101.556; evalue=1.76e-180; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010081 | regulation of inflorescence meristem growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=41.365; coverage=101.556; evalue=1.76e-180; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010082 | regulation of root meristem growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=41.365; coverage=101.556; evalue=1.76e-180; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010305 | leaf vascular tissue pattern formation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=41.365; coverage=101.556; evalue=1.76e-180; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048364 | root development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=41.365; coverage=101.556; evalue=1.76e-180; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048507 | meristem development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=41.365; coverage=101.556; evalue=1.76e-180; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050793 | regulation of developmental process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.398; coverage=96.747; evalue=1.6e-157; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090693 | plant organ senescence | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=41.365; coverage=101.556; evalue=1.76e-180; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000034 | regulation of seed maturation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=43.382; coverage=96.181; evalue=1.52e-170; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005773 | vacuole | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.088; coverage=96.888; evalue=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005783 | endoplasmic reticulum | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.088; coverage=96.888; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005789 | endoplasmic reticulum membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.088; coverage=96.888; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.088; coverage=96.888; evalue=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016020 | membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=41.365; coverage=101.556; evalue=1.76e-180; UniProt GO evidence=NAS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004180 | carboxypeptidase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.088; coverage=96.888; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004181 | metallocarboxypeptidase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.088; coverage=96.888; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008236 | serine-type peptidase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.106; coverage=98.727; evalue=9.63e-141; UniProt GO evidence=NAS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008239 | dipeptidyl-peptidase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.106; coverage=98.727; evalue=9.63e-141; UniProt GO evidence=NAS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016805 | dipeptidase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.106; coverage=98.727; evalue=9.63e-141; UniProt GO evidence=NAS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046872 | metal ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.088; coverage=96.888; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050129 | N-formylglutamate deformylase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.106; coverage=98.727; evalue=9.63e-141; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G54720 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=41.365; coverage=101.556; evalue=1.76e-180 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G19740 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.088; coverage=96.888; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os03g0790600 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.398; coverage=96.747; evalue=1.6e-157 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:10003 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.106; coverage=98.727; evalue=9.63e-141 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | zma:100147738 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=43.382; coverage=96.181; evalue=1.52e-170 | UniProtKB/Swiss-Prot DAT 2026 current_release |