Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_025691 |
|---|---|
| Query reference | OH1004 |
| Location | Chr05:115336454-115345701 (-) |
| Description | Similar to RSA1: Protein SHORT ROOT IN SALT MEDIUM 1 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_025691 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 45 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At2g03150 |
Required for salt tolerance and sodium (Na) homeostasis after salt stress. |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006351 | DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=32.692; coverage=9.836; evalue=1.46e-14; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006355 | regulation of DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.799; coverage=46.847; evalue=1.09e-134; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006397 | mRNA processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.229; coverage=13.745; evalue=1.83e-11; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006974 | DNA damage response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.229; coverage=13.745; evalue=1.83e-11; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008284 | positive regulation of cell population proliferation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=32.692; coverage=9.836; evalue=1.46e-14; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008380 | RNA splicing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.229; coverage=13.745; evalue=1.83e-11; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009411 | response to UV | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.229; coverage=13.745; evalue=1.83e-11; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009651 | response to salt stress | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.799; coverage=46.847; evalue=1.09e-134; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016055 | Wnt signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.229; coverage=13.745; evalue=1.83e-11; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030308 | negative regulation of cell growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.229; coverage=13.745; evalue=1.83e-11; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030335 | positive regulation of cell migration | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=32.692; coverage=9.836; evalue=1.46e-14; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031647 | regulation of protein stability | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.229; coverage=13.745; evalue=1.83e-11; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032435 | negative regulation of proteasomal ubiquitin-dependent protein catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.229; coverage=13.745; evalue=1.83e-11; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032784 | regulation of DNA-templated transcription elongation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.229; coverage=13.745; evalue=1.83e-11; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042752 | regulation of circadian rhythm | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.229; coverage=13.745; evalue=1.83e-11; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043086 | negative regulation of catalytic activity | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.229; coverage=13.745; evalue=1.83e-11; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043484 | regulation of RNA splicing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.229; coverage=13.745; evalue=1.83e-11; UniProt GO evidence=IDA:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045892 | negative regulation of DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.229; coverage=13.745; evalue=1.83e-11; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048511 | rhythmic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.229; coverage=13.745; evalue=1.83e-11; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0055078 | sodium ion homeostasis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.799; coverage=46.847; evalue=1.09e-134; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090263 | positive regulation of canonical Wnt signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.229; coverage=13.745; evalue=1.83e-11; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090311 | regulation of protein deacetylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.229; coverage=13.745; evalue=1.83e-11; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000003 | positive regulation of DNA damage checkpoint | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.229; coverage=13.745; evalue=1.83e-11; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000785 | chromatin | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.229; coverage=13.745; evalue=1.83e-11; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.799; coverage=46.847; evalue=1.09e-134; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005641 | nuclear envelope lumen | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=32.692; coverage=9.836; evalue=1.46e-14; UniProt GO evidence=ISO:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=32.692; coverage=9.836; evalue=1.46e-14; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.799; coverage=46.847; evalue=1.09e-134; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005759 | mitochondrial matrix | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.229; coverage=13.745; evalue=1.83e-11; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005794 | Golgi apparatus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=32.692; coverage=9.836; evalue=1.46e-14; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005819 | spindle | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.229; coverage=13.745; evalue=1.83e-11; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016604 | nuclear body | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.229; coverage=13.745; evalue=1.83e-11; UniProt GO evidence=IDA:HPA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0044609 | DBIRD complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.229; coverage=13.745; evalue=1.83e-11; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048471 | perinuclear region of cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=32.692; coverage=9.836; evalue=1.46e-14; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000774 | adenyl-nucleotide exchange factor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.229; coverage=13.745; evalue=1.83e-11; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000978 | RNA polymerase II cis-regulatory region sequence-specific DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=32.692; coverage=9.836; evalue=1.46e-14; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000993 | RNA polymerase II complex binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.229; coverage=13.745; evalue=1.83e-11; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003712 | transcription coregulator activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.799; coverage=46.847; evalue=1.09e-134; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003713 | transcription coactivator activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=32.692; coverage=9.836; evalue=1.46e-14; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003714 | transcription corepressor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=32.692; coverage=9.836; evalue=1.46e-14; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003723 | RNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=32.051; coverage=9.836; evalue=1.05e-13; UniProt GO evidence=HDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004857 | enzyme inhibitor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.229; coverage=13.745; evalue=1.83e-11; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005509 | calcium ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.799; coverage=46.847; evalue=1.09e-134; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019899 | enzyme binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.229; coverage=13.745; evalue=1.83e-11; UniProt GO evidence=IPI:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051082 | unfolded protein binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.229; coverage=13.745; evalue=1.83e-11; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G03150 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.799; coverage=46.847; evalue=1.09e-134 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:55749 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=32.051; coverage=9.836; evalue=1.05e-13 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:57805 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.229; coverage=13.745; evalue=1.83e-11 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:219158 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.267; coverage=13.682; evalue=2.01e-11 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:67500 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=32.692; coverage=9.836; evalue=1.46e-14 | UniProtKB/Swiss-Prot DAT 2026 current_release |