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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_020731
Query referenceOH1004
LocationChr04:107209894-107212473 (-)
DescriptionSimilar to AP1M2: AP-1 complex subunit mu-2 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_020731 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 25 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At1g60780 Subunit of clathrin-associated adaptor protein complex 1 that plays a role in protein sorting at the trans-Golgi network and early endosomes (TGN/EE).
The AP-1 μ adaptin is required for KNOLLE localization at the cell plate to mediate cytokinesis in Arabidopsis.2013 · DOI: 10.1093/pcp/pct048
Arabidopsis μ-adaptin subunit AP1M of adaptor protein complex 1 mediates late secretory and vacuolar traffic and is required for growth.2013 · DOI: 10.1073/pnas.1300460110
HAPLESS13, the Arabidopsis μ1 adaptin, is essential for protein sorting at the trans-Golgi network/early endosome.2013 · DOI: 10.1104/pp.113.221051
At1g10730 Subunit of clathrin-associated adaptor protein complex 1 that plays a role in protein sorting at the trans-Golgi network and early endosomes (TGN/EE).
Arabidopsis μ-adaptin subunit AP1M of adaptor protein complex 1 mediates late secretory and vacuolar traffic and is required for growth.2013 · DOI: 10.1073/pnas.1300460110

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006886intracellular protein transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=90.421; coverage=100.0; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006892post-Golgi vesicle-mediated transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=90.421; coverage=100.0; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006896Golgi to vacuole transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=90.421; coverage=100.0; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0007034vacuolar transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=90.421; coverage=100.0; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016192vesicle-mediated transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=62.028; coverage=99.065; evalue=0.0; UniProt GO evidence=NAS:ComplexPortalUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0032438melanosome organizationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=62.028; coverage=99.065; evalue=0.0; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0035646endosome to melanosome transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=62.028; coverage=99.065; evalue=0.0; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0035653clathrin-coated vesicle cargo loading, AP-1-mediatedBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=90.421; coverage=100.0; evalue=0.0; UniProt GO evidence=IPI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0060155platelet dense granule organizationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=62.028; coverage=99.065; evalue=0.0; UniProt GO evidence=NAS:ComplexPortalUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0071280cellular response to copper ionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=90.421; coverage=100.0; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000139Golgi membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=62.028; coverage=99.065; evalue=0.0; UniProt GO evidence=TAS:ReactomeUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=90.421; coverage=100.0; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005765lysosomal membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=62.028; coverage=99.065; evalue=0.0; UniProt GO evidence=TAS:ReactomeUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005769early endosomeCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=62.028; coverage=99.065; evalue=0.0; UniProt GO evidence=NAS:ComplexPortalUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005802trans-Golgi networkCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=90.421; coverage=100.0; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005829cytosolCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=62.028; coverage=99.065; evalue=0.0; UniProt GO evidence=TAS:ReactomeUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005886plasma membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=62.028; coverage=99.065; evalue=0.0; UniProt GO evidence=TAS:ReactomeUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0012510trans-Golgi network transport vesicle membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=90.421; coverage=100.0; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016020membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=62.028; coverage=99.065; evalue=0.0; UniProt GO evidence=HDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0030121AP-1 adaptor complexCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=90.421; coverage=100.0; evalue=0.0; UniProt GO evidence=IPI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0030659cytoplasmic vesicle membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=62.028; coverage=99.065; evalue=0.0; UniProt GO evidence=TAS:ReactomeUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0031901early endosome membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=90.421; coverage=100.0; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0032588trans-Golgi network membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=62.028; coverage=99.065; evalue=0.0; UniProt GO evidence=TAS:ReactomeUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0070062extracellular exosomeCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=62.028; coverage=99.065; evalue=0.0; UniProt GO evidence=HDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0035615clathrin adaptor activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=90.421; coverage=100.0; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G10730KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=85.981; coverage=100.0; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G60780KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=90.421; coverage=100.0; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGbta:504310KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=62.028; coverage=99.065; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGhsa:8907KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=62.028; coverage=99.065; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGrno:306332KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=62.028; coverage=99.065; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release