Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_019147 |
|---|---|
| Query reference | OH1004 |
| Location | Chr04:24687999-24690035 (-) |
| Description | Similar to HCC1: Protein SCO1 homolog 1%2C mitochondrial (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_019147 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 26 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At3g08950 |
Acts as a copper chaperone, delivering copper to the Cu(A) site on the cytochrome c oxidase subunit II (COX2) (By similarity). |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006878 | intracellular copper ion homeostasis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=41.81; coverage=72.727; evalue=9.33e-62; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006879 | intracellular iron ion homeostasis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.13; coverage=67.712; evalue=8.2e-59; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006882 | intracellular zinc ion homeostasis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.13; coverage=67.712; evalue=8.2e-59; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006955 | immune response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.13; coverage=67.712; evalue=8.2e-59; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007005 | mitochondrion organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.13; coverage=67.712; evalue=8.2e-59; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009306 | protein secretion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.13; coverage=67.712; evalue=8.2e-59; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009793 | embryo development ending in seed dormancy | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.917; coverage=105.956; evalue=4.22e-131; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010467 | gene expression | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.13; coverage=67.712; evalue=8.2e-59; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010608 | post-transcriptional regulation of gene expression | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.13; coverage=67.712; evalue=8.2e-59; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016042 | lipid catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.13; coverage=67.712; evalue=8.2e-59; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0033617 | mitochondrial respiratory chain complex IV assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.917; coverage=105.956; evalue=4.22e-131; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035264 | multicellular organism growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.13; coverage=67.712; evalue=8.2e-59; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045454 | cell redox homeostasis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=41.949; coverage=73.981; evalue=3.33e-61; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048872 | homeostasis of number of cells | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.13; coverage=67.712; evalue=8.2e-59; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051898 | negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.13; coverage=67.712; evalue=8.2e-59; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0055070 | copper ion homeostasis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.13; coverage=67.712; evalue=8.2e-59; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0072659 | protein localization to plasma membrane | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.13; coverage=67.712; evalue=8.2e-59; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1900077 | negative regulation of cellular response to insulin stimulus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.13; coverage=67.712; evalue=8.2e-59; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1901799 | negative regulation of proteasomal protein catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.13; coverage=67.712; evalue=8.2e-59; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1904959 | regulation of cytochrome-c oxidase activity | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.13; coverage=67.712; evalue=8.2e-59; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1905291 | positive regulation of CAMKK-AMPK signaling cascade | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.13; coverage=67.712; evalue=8.2e-59; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.917; coverage=105.956; evalue=4.22e-131; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005743 | mitochondrial inner membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.917; coverage=105.956; evalue=4.22e-131; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005507 | copper ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.917; coverage=105.956; evalue=4.22e-131; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016531 | copper chaperone activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=41.81; coverage=72.727; evalue=9.33e-62; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046872 | metal ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.13; coverage=67.712; evalue=8.2e-59; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G08950 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.917; coverage=105.956; evalue=4.22e-131 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | bta:508586 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=41.026; coverage=73.354; evalue=1.33e-58 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:6341 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=41.81; coverage=72.727; evalue=9.33e-62 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:52892 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.13; coverage=67.712; evalue=8.2e-59 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | spo:2539826 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=41.949; coverage=73.981; evalue=3.33e-61 | UniProtKB/Swiss-Prot DAT 2026 current_release |