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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_018433
Query referenceOH1004
LocationChr04:12882975-12888584 (-)
DescriptionSimilar to NPF3.1: Protein NRT1/ PTR FAMILY 3.1 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_018433 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 22 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At1g68570 May act as an efflux-type nitrite transporter.
A nitrite transporter associated with nitrite uptake by higher plant chloroplasts.2007 · DOI: 10.1093/pcp/pcm073
At5g01180 Peptide transporter.
AtPTR1 and AtPTR5 transport dipeptides in planta.2008 · DOI: 10.1104/pp.108.123844
At3g54140 Peptide transporter.
AtPTR1, a plasma membrane peptide transporter expressed during seed germination and in vascular tissue of Arabidopsis.2004 · DOI: 10.1111/j.1365-313x.2004.02224.x
AtPTR1 and AtPTR5 transport dipeptides in planta.2008 · DOI: 10.1104/pp.108.123844
At1g69870 Low-affinity proton-dependent nitrate transporter.
The Arabidopsis nitrate transporter NRT1.7, expressed in phloem, is responsible for source-to-sink remobilization of nitrate.2009 · DOI: 10.1105/tpc.109.067603
At1g62200 Protein NRT1/ PTR FAMILY 8.5. No verified direct reference in this release

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006857oligopeptide transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=35.591; coverage=68.575; evalue=9.85e-117; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009860pollen tube growthBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.023; coverage=64.471; evalue=1.97e-134; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010336gibberellic acid homeostasisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.916; coverage=64.471; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0015031protein transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.023; coverage=64.471; evalue=1.97e-134; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0015706nitrate transmembrane transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=37.881; coverage=67.279; evalue=1.61e-117; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042128nitrate assimilationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.916; coverage=64.471; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042938dipeptide transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.023; coverage=64.471; evalue=1.97e-134; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042939tripeptide transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.124; coverage=64.579; evalue=1.9e-132; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0055085transmembrane transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.916; coverage=64.471; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.023; coverage=64.471; evalue=1.97e-134; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005737cytoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.916; coverage=64.471; evalue=0.0; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005886plasma membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.916; coverage=64.471; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009506plasmodesmaCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.124; coverage=64.579; evalue=1.9e-132; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009507chloroplastCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=37.881; coverage=67.279; evalue=1.61e-117; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009705plant-type vacuole membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=35.591; coverage=68.575; evalue=9.85e-117; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016020membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.023; coverage=64.471; evalue=1.97e-134; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0097708intracellular vesicleCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.916; coverage=64.471; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0015293symporter activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=37.881; coverage=67.279; evalue=1.61e-117; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0022857transmembrane transporter activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.916; coverage=64.471; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042937tripeptide transmembrane transporter activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.023; coverage=64.471; evalue=1.97e-134; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0071916dipeptide transmembrane transporter activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.023; coverage=64.471; evalue=1.97e-134; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0080054low-affinity nitrate transmembrane transporter activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=37.881; coverage=67.279; evalue=1.61e-117; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G62200KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=35.591; coverage=68.575; evalue=9.85e-117UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G68570KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.916; coverage=64.471; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G69870KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=37.881; coverage=67.279; evalue=1.61e-117UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G54140KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.124; coverage=64.579; evalue=1.9e-132UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G01180KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.023; coverage=64.471; evalue=1.97e-134UniProtKB/Swiss-Prot DAT 2026 current_release