Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_017028 |
|---|---|
| Query reference | OH1004 |
| Location | Chr03:139306117-139307289 (-) |
| Description | Similar to ROH1: Protein ROH1 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_017028 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 25 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At1g18740 |
Together with TRANSTHYRETIN-LIKE protein (TTL), prevents plant growth and development, but by opposition to TTL, regulates positively cold tolerance, probably in a brassinosteroid (BR) and allantoin-dependent manner. | No verified direct reference in this release |
At1g74450 |
Involved in the regulation of plant growth, and modulates pollen development to ensure male fertility. | |
At1g63930 |
Required for seed coat mucilage deposition. |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006887 | exocytosis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.492; coverage=101.026; evalue=3.2e-119; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006904 | vesicle docking involved in exocytosis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.492; coverage=101.026; evalue=3.2e-119; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009409 | response to cold | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.492; coverage=101.026; evalue=3.2e-119; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009555 | pollen development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=49.497; coverage=102.051; evalue=1.96e-115; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009631 | cold acclimation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.492; coverage=101.026; evalue=3.2e-119; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009734 | auxin-activated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.492; coverage=101.026; evalue=3.2e-119; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009741 | response to brassinosteroid | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.492; coverage=101.026; evalue=3.2e-119; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009742 | brassinosteroid mediated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.492; coverage=101.026; evalue=3.2e-119; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010214 | seed coat development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.278; coverage=90.513; evalue=4.99e-64; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016192 | vesicle-mediated transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.492; coverage=101.026; evalue=3.2e-119; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019428 | allantoin biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.492; coverage=101.026; evalue=3.2e-119; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0040008 | regulation of growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=49.497; coverage=102.051; evalue=1.96e-115; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048354 | mucilage biosynthetic process involved in seed coat development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.278; coverage=90.513; evalue=4.99e-64; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0080001 | mucilage extrusion from seed coat | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=49.497; coverage=102.051; evalue=1.96e-115; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140115 | export across plasma membrane | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.492; coverage=101.026; evalue=3.2e-119; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1900140 | regulation of seedling development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.492; coverage=101.026; evalue=3.2e-119; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1901332 | negative regulation of lateral root development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.492; coverage=101.026; evalue=3.2e-119; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000012 | regulation of auxin polar transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.492; coverage=101.026; evalue=3.2e-119; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000145 | exocyst | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.492; coverage=101.026; evalue=3.2e-119; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.492; coverage=101.026; evalue=3.2e-119; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.492; coverage=101.026; evalue=3.2e-119; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=49.497; coverage=102.051; evalue=1.96e-115; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.492; coverage=101.026; evalue=3.2e-119; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016020 | membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=49.497; coverage=102.051; evalue=1.96e-115; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031982 | vesicle | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.492; coverage=101.026; evalue=3.2e-119; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G18740 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.492; coverage=101.026; evalue=3.2e-119 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G63930 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.278; coverage=90.513; evalue=4.99e-64 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G74450 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=49.497; coverage=102.051; evalue=1.96e-115 | UniProtKB/Swiss-Prot DAT 2026 current_release |