Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_016944 |
|---|---|
| Query reference | OH1004 |
| Location | Chr03:137374563-137379673 (-) |
| Description | Similar to BASS1: Probable sodium/metabolite cotransporter BASS1%2C chloroplastic (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_016944 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 10 GO annotations and 6 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At1g78560 |
May function as sodium-coupled metabolite transporter across the chloroplast envelope. | No verified direct reference in this release |
At2g26900 |
Sodium-coupled metabolite transporter that plays a crucial role in pyruvate transport across the chloroplast envelope. |
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os01g0645200 |
May function as sodium-coupled metabolite transporter across the chloroplast envelope. | No verified direct reference in this release |
Os04g0381100 |
May function as sodium-coupled metabolite transporter across the chloroplast envelope. | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006814 | sodium ion transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=35.759; coverage=59.176; evalue=4.12e-47; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006849 | plasma membrane pyruvate transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.563; coverage=73.783; evalue=1.78e-63; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0098717 | pantothenate import across plasma membrane | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.312; coverage=58.801; evalue=2.2e-67; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=35.759; coverage=59.176; evalue=4.12e-47; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.312; coverage=58.801; evalue=2.2e-67; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009534 | chloroplast thylakoid | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.563; coverage=73.783; evalue=1.78e-63; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009941 | chloroplast envelope | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.312; coverage=58.801; evalue=2.2e-67; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016020 | membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.312; coverage=58.801; evalue=2.2e-67; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015293 | symporter activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.51; coverage=66.105; evalue=9.94e-67; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050833 | pyruvate transmembrane transporter activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.563; coverage=73.783; evalue=1.78e-63; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G78560 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.312; coverage=58.801; evalue=2.2e-67 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT2G26900 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.563; coverage=73.783; evalue=1.78e-63 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | bsu:BSU19350 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=35.759; coverage=59.176; evalue=4.12e-47 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os01g0645200 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.51; coverage=66.105; evalue=9.94e-67 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os04g0381100 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.675; coverage=58.801; evalue=2.75e-61 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | osa:4335634 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.675; coverage=58.801; evalue=2.75e-61 | UniProtKB/Swiss-Prot DAT 2026 current_release |